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Report for CCDS78699.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
78699.1 Public Mus musculus 1 Uchl5 23 108 98 CCDS HistoryNCBI Gene:56207Re-query CCDS DB by CCDS ID:78699.1Re-query CCDS DB by GeneID:56207See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 78699.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000018333.12 ENSMUSP00000018333.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000018333.12Link to Ensembl Protein Viewer:ENSMUSP00000018333.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000018333Re-query CCDS DB by Protein ID:ENSMUSP00000018333
Original member Current member NCBI NM_001159866.1 NP_001153338.1 Accepted alive Link to Nucleotide Sequence:NM_001159866.1Link to Protein Sequence:NP_001153338.1Re-query CCDS DB by Nucleotide ID:NM_001159866Re-query CCDS DB by Protein ID:NP_001153338Link to BLAST:NP_001153338.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001153338.1 328 Q9WUP7-2 328 100% 0 0

Chromosomal Locations for CCDS 78699.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 143777401 143777476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 143783966 143784029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 143786130 143786235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 143794277 143794402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 143794483 143794544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 143794680 143794810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 143796762 143796825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 143798391 143798493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 143799924 143800034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 143802135 143802233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 143806684 143806728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (987 nt):
ATGTCGAGCAATGCCGGGGAGTGGTGTCTCATGGAAAGCGACCCCGGGGTCTTCACCGAGCTCATTAAAG
GATTCGGTTGCCGAGGGGCCCAAGTAGAAGAAATATGGAGCTTAGAACCTGAGAGTTTTGAAAAGCTAAA
GCCAGTTCATGGGTTAATTTTTCTTTTCAAGTGGCAGCCAGGAGAAGAACCTGCTGGCTCTGTGGTCCAG
GACTCCAGACTTGAAACAATATTTTTTGCCAAGCAGGTAATTAATAATGCTTGTGCCACTCAGGCTATCG
TAAGTGTACTACTGAACTGTACGCATCAAGATGTGCATTTAGGAGAGACATTATCAGAATTTAAAGAATT
TTCTCAAAGTTTTGATGCAGCTATGAAGGGGCTGGCATTGAGTAACTCAGATGTGATTCGACAAGTGCAC
AACAGTTTTGCCAGGCAGCAGATGTTTGAATTTGATACAAAGACACCAGCCAAAGAGGAGGATGCTTTTC
ACTTTGTCAGTTACGTTCCAGTCAATGGGAGGCTGTATGAACTAGACGGGTTAAGAGAGGGCCCAATTGA
TTTAGGTGCATGCAATCAAGATGACTGGATTACTGCAGTGAGGCCAGTAATAGAGAAAAGGATTCAAAAG
TATAGTGAAGGAGAAATTCGATTTAATTTAATGGCCATTGTATCTGACAGAAAAATGATATATGAACAGA
AGATAGCAGAGTTACAAAGACAACTTGCAGAGGAACCCATGGATACAGATCAAGGTAGTACCGTGTTAAG
TGCTATTCAGTCAGAAGTTGCCAGAAACCAGATGCTTATTGAAGAAGAGGTACAAAAGTTAAAGAGATAT
AAGATTGAAAATATCAGAAGGAAGCATAATTACTTGCCTTTCATTATGGAATTGTTAAAGACCTTAGCTG
AGCACCAGCAGTTAATTCCACTTGTGGAAAAGGCAAAAGAAAAACAGAATGCAAAGAAAGCTCAGGAAAC
TAAGTGA

Translation (328 aa):
MSSNAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPESFEKLKPVHGLIFLFKWQPGEEPAGSVVQ
DSRLETIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVH
NSFARQQMFEFDTKTPAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQDDWITAVRPVIEKRIQK
YSEGEIRFNLMAIVSDRKMIYEQKIAELQRQLAEEPMDTDQGSTVLSAIQSEVARNQMLIEEEVQKLKRY
KIENIRRKHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNAKKAQETK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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