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Report for CCDS15057.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15057.1 Public Mus musculus 1 Wnt10a 23 108 98 CCDS HistoryNCBI Gene:22409Re-query CCDS DB by CCDS ID:15057.1Re-query CCDS DB by GeneID:22409See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15057.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000006718.14 ENSMUSP00000006718.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000006718.14Link to Ensembl Protein Viewer:ENSMUSP00000006718.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000006718Re-query CCDS DB by Protein ID:ENSMUSP00000006718
Original member Current member NCBI NM_009518.2 NP_033544.1 Accepted alive Link to Nucleotide Sequence:NM_009518.2Link to Protein Sequence:NP_033544.1Re-query CCDS DB by Nucleotide ID:NM_009518Re-query CCDS DB by Protein ID:NP_033544Link to BLAST:NP_033544.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033544.1 417 P70701 417 100% 0 0

Chromosomal Locations for CCDS 15057.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 74792171 74792283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74793363 74793625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74800533 74800912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74803123 74803620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1254 nt):
ATGGGCAGCGCCCACCCTCGCCCCTGGCTGCGGCTCCCACAAGGGCCCCAGCCGCGGCCTGAGTTCTGGG
CGCTCCTGTTCTTCCTACTGCTGCTGGCTGCCGCTGTGCCCAGGTCAGCACCCAACGACATCCTGGGCCT
CCGCCTACCCCCAGAGCCCGTGCTCAACGCCAACACAGTGTGCCTGACATTGCCCGGCCTGAGCCGGCGG
CAGATGGAGGTGTGTGTGCGTCACCCTGACGTGGCCGCCTCTGCTATCCAGGGCATCCAGATCGCCATCC
ATGAGTGCCAGCATCAGTTCCGGGACCAGCGCTGGAACTGCTCCAGCCTGGAGACTCGGAACAAAGTCCC
CTACGAGAGCCCCATCTTCAGCCGAGGTTTTCGAGAGAGTGCTTTCGCCTACGCCATAGCAGCTGCCGGG
GTGGTGCACGCAGTGTCCAACGCGTGCGCTCTGGGTAAACTGAAGGCTTGCGGTTGCGACGCCTCCAGAC
GTGGGGACGAAGAAGCTTTCCGTCGGAAGCTGCACCGCTTGCAGCTGGACGCGCTGCAGCGCGGAAAGGG
CTTGAGCCACGGGGTCCCTGAACACCCGGCCATACTTCCTGCCAGCCCAGGTCTGCAGGACTCCTGGGAG
TGGGGTGGCTGCAGTCCGGATGTGGGCTTCGGAGAACGCTTCTCTAAGGACTTTCTGGACTCCCGAGAGC
CTCACAGAGACATCCATGCTCGAATGAGACTCCACAACAACCGTGTGGGCCGGCAGGCGGTGATGGAGAA
CATGCGGCGTAAGTGCAAATGCCACGGCACCTCAGGCAGCTGCCAGCTCAAGACCTGCTGGCAGGTGACG
CCTGAGTTCCGCACAGTAGGGGCGCTGCTGCGCAACCGCTTCCACCGCGCCACGCTCATCCGGCCGCACA
ACCGCAACGGTGGCCAGCTGGAGCCCGGCCCCGCGGGAGCACCCTCGCCAGCACCGGGCACTCCAGGGCT
GCGCCGCAGGGCCAGCCACTCCGACCTGGTCTACTTTGAGAAATCTCCCGACTTCTGTGAGCGCGAGCCG
CGCCTGGACTCGGCAGGCACTGTGGGCCGCCTGTGCAATAAGAGCAGCACGGGTCCCGATGGCTGCGGCA
GCATGTGCTGTGGCCGCGGCCACAACATTCTGCGCCAGACGCGCAGCGAGCGCTGCCACTGCCGGTTCCA
CTGGTGCTGCTTCGTGGTCTGCGAAGAATGCCGCATCACCGAGTGGGTCAGCGTCTGCAAGTGA

Translation (417 aa):
MGSAHPRPWLRLPQGPQPRPEFWALLFFLLLLAAAVPRSAPNDILGLRLPPEPVLNANTVCLTLPGLSRR
QMEVCVRHPDVAASAIQGIQIAIHECQHQFRDQRWNCSSLETRNKVPYESPIFSRGFRESAFAYAIAAAG
VVHAVSNACALGKLKACGCDASRRGDEEAFRRKLHRLQLDALQRGKGLSHGVPEHPAILPASPGLQDSWE
WGGCSPDVGFGERFSKDFLDSREPHRDIHARMRLHNNRVGRQAVMENMRRKCKCHGTSGSCQLKTCWQVT
PEFRTVGALLRNRFHRATLIRPHNRNGGQLEPGPAGAPSPAPGTPGLRRRASHSDLVYFEKSPDFCEREP
RLDSAGTVGRLCNKSSTGPDGCGSMCCGRGHNILRQTRSERCHCRFHWCCFVVCEECRITEWVSVCK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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