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Report for CCDS21155.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21155.1 Public Mus musculus 7 Dpy19l3 23 108 98 CCDS HistoryNCBI Gene:233115Re-query CCDS DB by CCDS ID:21155.1Re-query CCDS DB by GeneID:233115See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21155.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000051377.14 ENSMUSP00000054747.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000051377.14Link to Ensembl Protein Viewer:ENSMUSP00000054747.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000051377Re-query CCDS DB by Protein ID:ENSMUSP00000054747
Original member Current member NCBI NM_178704.3 NP_848819.2 Accepted alive Link to Nucleotide Sequence:NM_178704.3Link to Protein Sequence:NP_848819.2Re-query CCDS DB by Nucleotide ID:NM_178704Re-query CCDS DB by Protein ID:NP_848819Link to BLAST:NP_848819.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_848819.2 716 Q71B07 716 100% 0 0

Chromosomal Locations for CCDS 21155.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 35690781 35690942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 35692777 35692935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 35695282 35695414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 35703489 35703571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 35707381 35707437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 35708060 35708171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 35708535 35708657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 35711861 35712019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 35712145 35712218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 35714126 35714227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 35716587 35716718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 35721545 35721679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 35722707 35722830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 35725291 35725436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 35727290 35727411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 35729686 35729776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 35749740 35749873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 35752615 35752717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2151 nt):
ATGATGTACATCCGGCAAAGAAAAGAGACAAAACCCATAGAAGTTTCTGAGGATTTTCCATCACCAAAAG
AAGATGTGAAGTTGGAAAAGAAATTGCCATCTGGTTGTGCCTCTGGAAGGTTCTGGAAGATCCTGTCATC
CGCAGTTGGCGGAACTGTGGCTCTTTGCATTGGACTTCTTACATCCGTTTACCTGGCCACCCTGCATGAG
AACGATTTGTGGTTTTCCAATATTAAGGAAGTAGAGCGAGAGATCTCATTCAGGACGGAATGTGGACTGT
ACTATTCTTACTACAAGCAGATGCTGCAGGCTCCGACCCTCCTGCAAGGTTTCCATGGCTTAATCTATGA
CAATAAAACTGAATCCATGAGGACGATCAACCTCCTTCAACGGATGAACATTTACCAAGAAGTTTTTCTC
AGTGTTTTATATAGAGTTCTCCCCATACAGAAATATCTAGAACCTGTTTATTTTTATATCTACACTCTGT
TCGGGCTCCAAGCAGTCTATGTCACGGCCCTTTATATAACCAGCTGGCTCCTTAGTGGCACCTGGCTGTC
GGGACTGTTGGCAGCCCTCTGGTACGTCACCAACAGAATAGACACCACAAGAGTCGAGTTTACCATCCCG
CTGAGGGAGAACTGGGCTCTGCCTTTTTTTGCAATTCAGATTGCAGCAATTACCTACTTCCTGAGACCAA
ATTTACAGCCTCTTTCTGAAAGGCTGACACTTCTTGCCATTTTCGTATCAACTTTTCTCTTTAGCCTGAC
ATGGCAATTTAACCAGTTCATGATGCTGCTGCAGGCACTGGTGCTGTTCATCCTGGACTCCCTGGACATG
CTGCCGGCCATGAAGGCCACCTGGCTGTACGGGATACAGATAAGCTGCCTGCTCCTCGTCTGCACGCTTC
AGTTCTTTAACTCCATGATTCTGGGATCGTTGCTCATCAGTTTTAACCTTTCAGTATTAATTGTAAGAAA
ACTTCAGAAAAACCTGAAGACTGGATCCTTCCTGACTAGAATTTGGAAACTACTGTTGCATTTGCTTCTA
GTTTTCTGTTTGACACTTTTTCTCAACAACATTATTAAGAAAGTTCTTAACCTGAAGTCAGATGAACACA
TCTTTAAATTTCTGAAGGCCAAATTTGGGTTTGGAGCAACAAGGGATTTCGATGCAAATCTCTATCTGTG
TGAGGAGGCCTTCGGCCTCCTGCCTCTCAACACGTTCCAGAGGCTCTCGGAGACACTGCTTTTTTACGCA
TACATGTTTGTCCTCGTGGTCACAGTGGTTACAGCATCCGTTGTAGCCTTTCATAATCTCAGTGATTCCA
CAAGTCTGAAGTCCATGGATCAGACAAGAAAGCGTGCTGTTGACCTGAAGCCAGAAGCTGCGTACAACCT
GATCCATACCATTCTGTTCGGGGTCTTGGCGTTGAGTACGATGAGGATGAAGTACCTGTGGACCTCCCAC
ATGTGTGTGTTCGCGTCCTTCGGCCTGTGCAGCTCTGAAGTCTGGGAACTGCTACTGAGGCTGGTTCATC
TCTGTAACCCAAAGCGGATCTGGGTCCTGCGCTACCTGGTGCCCGTTCTCACCCTGCTGTACCTGTGCTA
TAAGTCCTGGCCAGGAGTGATGGATGAACTCTCGGAGCTGAAAGAATTCTACGACCCGGATACAGTGGAG
CTGATGACCTGGATTAACTCTAACACACCAAGGAAGGCTGTGTTCGCTGGAAGCATGCAGTTGCTGGCTG
GAGTCAAGCTGTGCACAGGACGGACCCTAACCAACCACCCACACTATGAAGATAAAAGTCTGAGAGAGCG
GACCCAGGCGGTTTATCAGATCTATGCGAAGAGGTCGCCAGAGGAAGTGCACGCACTGCTGAGGTCCTTT
GGCACTGACTTCGTGATCCTGGAGGACAGCATCTGCTACGAACGCAGGCACCACAGGGGCTGCCGGCTGC
GCGACTTGCTGGATGTGGCCAACGGACATGAAATGGATGGGCCAGGAGAGAGTGACCCTGACTTGAGACC
TGCAGACCACCCTCGCTTCTGTGAAGAGATTAAAAGGAACCTGCCCTCCTATGCAGCCCACTTCACTAGA
GTATTCCAGAACAAGACATTCCATGTCTACAAGCTGTCCAGAAACAAATAA

Translation (716 aa):
MMYIRQRKETKPIEVSEDFPSPKEDVKLEKKLPSGCASGRFWKILSSAVGGTVALCIGLLTSVYLATLHE
NDLWFSNIKEVEREISFRTECGLYYSYYKQMLQAPTLLQGFHGLIYDNKTESMRTINLLQRMNIYQEVFL
SVLYRVLPIQKYLEPVYFYIYTLFGLQAVYVTALYITSWLLSGTWLSGLLAALWYVTNRIDTTRVEFTIP
LRENWALPFFAIQIAAITYFLRPNLQPLSERLTLLAIFVSTFLFSLTWQFNQFMMLLQALVLFILDSLDM
LPAMKATWLYGIQISCLLLVCTLQFFNSMILGSLLISFNLSVLIVRKLQKNLKTGSFLTRIWKLLLHLLL
VFCLTLFLNNIIKKVLNLKSDEHIFKFLKAKFGFGATRDFDANLYLCEEAFGLLPLNTFQRLSETLLFYA
YMFVLVVTVVTASVVAFHNLSDSTSLKSMDQTRKRAVDLKPEAAYNLIHTILFGVLALSTMRMKYLWTSH
MCVFASFGLCSSEVWELLLRLVHLCNPKRIWVLRYLVPVLTLLYLCYKSWPGVMDELSELKEFYDPDTVE
LMTWINSNTPRKAVFAGSMQLLAGVKLCTGRTLTNHPHYEDKSLRERTQAVYQIYAKRSPEEVHALLRSF
GTDFVILEDSICYERRHHRGCRLRDLLDVANGHEMDGPGESDPDLRPADHPRFCEEIKRNLPSYAAHFTR
VFQNKTFHVYKLSRNK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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