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Report for CCDS12967.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12967.1 Public Homo sapiens 19 C19orf18 24 110 108 CCDS HistoryNCBI Gene:147685Re-query CCDS DB by CCDS ID:12967.1Re-query CCDS DB by GeneID:147685See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12967.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000314391.3 ENSP00000321519.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000314391.3Link to Ensembl Protein Viewer:ENSP00000321519.2Re-query CCDS DB by Nucleotide ID:ENST00000314391Re-query CCDS DB by Protein ID:ENSP00000321519
Original member Current member NCBI NM_152474.5 NP_689687.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152474.5Link to Protein Sequence:NP_689687.1Re-query CCDS DB by Nucleotide ID:NM_152474Re-query CCDS DB by Protein ID:NP_689687Link to BLAST:NP_689687.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689687.1 215 Q8NEA5 215 100% 0 0

Chromosomal Locations for CCDS 12967.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 57958602 57958717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57961391 57961551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57966530 57966632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57972463 57972504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57974099 57974203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57974312 57974432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (648 nt):
ATGGACAAGGTTCAGAGTGGTTTCCTCATTTTGTTTTTGTTTTTAATGGAATGCCAACTTCATTTATGCT
TGCCGTATGCAGATGGACTCCATCCCACTGGAAACATAACAGGCTTACCAGGCAGTAAACGGTCACAACC
ACCCAGAAACATCACCAAAGAGCCCAAAGTGTTCTTTCATAAAACCCAGTTGCCTGGGATTCAAGGGGCT
GCCTCGAGATCCACGGCTGCATCCCCTACGAACCCCATGAAATTCCTGAGGAATAAAGCAATAATTCGGC
ATAGACCTGCTCTTGTTAAAGTAATTTTAATTTCGAGCGTAGCCTTCAGCATTGCCCTGATATGTGGGAT
GGCAATCTCCTATATGATATATCGACTGGCACAGGCTGAGGAAAGACAACAGCTCGAGTCACTTTATAAG
AACCTCAGGATACCGTTATTAGGAGATGAAGAAGAGGGCTCAGAGGACGAGGGTGAGTCCACGCACCTAC
TTCCAGAGAACGAAAATGAGCTGGAAAAGTTCATCCACTCAGTTATTATATCAAAAAGAAGCAAAAATAT
TAAGAAGAAACTGAAGGAAGAGCAAAACTCAGTAACAGAAAACAAAACAAAGAATGCGTCACATAATGGA
AAAATGGAAGACTTGTGA

Translation (215 aa):
MDKVQSGFLILFLFLMECQLHLCLPYADGLHPTGNITGLPGSKRSQPPRNITKEPKVFFHKTQLPGIQGA
ASRSTAASPTNPMKFLRNKAIIRHRPALVKVILISSVAFSIALICGMAISYMIYRLAQAEERQQLESLYK
NLRIPLLGDEEEGSEDEGESTHLLPENENELEKFIHSVIISKRSKNIKKKLKEEQNSVTENKTKNASHNG
KMEDL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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