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Report for CCDS6040.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6040.1 Public Homo sapiens 8 CHMP7 24 110 108 CCDS HistoryNCBI Gene:91782Re-query CCDS DB by CCDS ID:6040.1Re-query CCDS DB by GeneID:91782See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6040.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000313219.8 ENSP00000324491.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000313219.8Link to Ensembl Protein Viewer:ENSP00000324491.7Re-query CCDS DB by Nucleotide ID:ENST00000313219Re-query CCDS DB by Protein ID:ENSP00000324491
Original member Current member EBI ENST00000397677.6 ENSP00000380794.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000397677.6Link to Ensembl Protein Viewer:ENSP00000380794.1Re-query CCDS DB by Nucleotide ID:ENST00000397677Re-query CCDS DB by Protein ID:ENSP00000380794
Original member Current member NCBI NM_152272.5 NP_689485.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152272.5Link to Protein Sequence:NP_689485.1Re-query CCDS DB by Nucleotide ID:NM_152272Re-query CCDS DB by Protein ID:NP_689485Link to BLAST:NP_689485.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689485.1 453 Q8WUX9-1 453 100% 0 0

Chromosomal Locations for CCDS 6040.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 23246696 23246994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 23249210 23249381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 23255247 23255432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 23256460 23256593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 23258033 23258081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 23258330 23258449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 23258732 23258830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 23259066 23259126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 23260144 23260323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 23260538 23260599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1362 nt):
ATGTGGTCCCCGGAGCGGGAGGCCGAGGCCCCAGCCGGGGGAGACCCGGCGGGCCTTCTGCCCCCCGAGT
GGGAGGAGGACGAGGAGCGCATGTCCTTCCTGTTCTCCGCTTTCAAGAGGAGTCGCGAGGTGAACAGCAC
CGACTGGGACAGCAAGATGGGCTTCTGGGCGCCGTTGGTGCTGAGCCACAGCCGCCGCCAGGGGGTGGTG
CGCCTGCGTCTGCGGGACTTGCAGGAGGCCTTTCAGCGCAAGGGGAGCGTCCCGCTGGGGCTGGCCACGG
TGCTGCAGGACCTGCTGCGTCGAGGGGAGCTGCAGCGGGAGTCAGACTTCATGGCCAGTGTAGACAGCAG
CTGGATCTCCTGGGGGGTTGGGGTCTTCCTGCTGAAGCCTCTCAAGTGGACTCTTTCTAACATGCTGGGA
GATAATAAGGTTCCAGCTGAGGAGGTCCTTGTCGCTGTGGAGCTGTTGAAGGAAAAGGCTGAGGAGGTGT
ATCGTCTGTATCAGAACTCGCCCCTCTCCTCCCACCCCGTGGTGGCCCTGTCAGAGCTCAGCACCCTCTG
TGCTAACTCCTGCCCAGATGAGAGGACCTTCTACTTGGTGTTGCTGCAGCTGCAGAAGGAGAAGAGGGTC
ACAGTCCTCGAGCAGAACGGGGAGAAGATTGTGAAGTTTGCCCGAGGGCCACGTGCCAAGGTCTCTCCAG
TCAATGACGTAGATGTTGGGGTGTACCAGCTGATGCAGAGTGAACAGCTTCTCTCACGCAAAGTGGAGTC
CTTATCCCAGGAAGCAGAGAGGTGTAAAGAAGAAGCCCGCCGGGCATGCCGAGCAGGAAAGAAGCAGCTG
GCACTGAGGTCTCTCAAGGCCAAGCAACGGACAGAGAAGCGCATCGAGGCCTTGCATGCCAAGCTGGACA
CTGTTCAAGGCATCCTGGACCGGATCTATGCCTCCCAGACAGATCAGATGGTTTTTAACGCCTACCAGGC
TGGGGTAGGAGCACTCAAACTCTCCATGAAGGATGTCACAGTGGAGAAGGCAGAGAGCCTCGTGGATCAG
ATCCAAGAGCTCTGTGACACCCAGGATGAAGTTTCTCAGACTCTGGCTGGTGGGGTAACAAATGGCTTAG
ATTTTGACAGTGAAGAACTGGAGAAGGAATTGGACATCCTCCTTCAGGATACCACCAAAGAACCTTTGGA
TCTGCCTGACAACCCCCGCAATAGGCATTTTACCAACAGCGTGCCTAACCCTAGGATCTCAGATGCTGAA
CTTGAAGCTGAACTTGAGAAACTGTCCTTATCAGAGGGAGGTTTGGTCCCAAGCAGTAAATCTCCAAAAA
GGCAATTGGAACCGACTCTAAAGCCATTGTAG

Translation (453 aa):
MWSPEREAEAPAGGDPAGLLPPEWEEDEERMSFLFSAFKRSREVNSTDWDSKMGFWAPLVLSHSRRQGVV
RLRLRDLQEAFQRKGSVPLGLATVLQDLLRRGELQRESDFMASVDSSWISWGVGVFLLKPLKWTLSNMLG
DNKVPAEEVLVAVELLKEKAEEVYRLYQNSPLSSHPVVALSELSTLCANSCPDERTFYLVLLQLQKEKRV
TVLEQNGEKIVKFARGPRAKVSPVNDVDVGVYQLMQSEQLLSRKVESLSQEAERCKEEARRACRAGKKQL
ALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQTDQMVFNAYQAGVGALKLSMKDVTVEKAESLVDQ
IQELCDTQDEVSQTLAGGVTNGLDFDSEELEKELDILLQDTTKEPLDLPDNPRNRHFTNSVPNPRISDAE
LEAELEKLSLSEGGLVPSSKSPKRQLEPTLKPL


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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