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Report for CCDS53370.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53370.1 Public Homo sapiens 1 NUP210L 24 110 108 CCDS HistoryNCBI Gene:91181Re-query CCDS DB by CCDS ID:53370.1Re-query CCDS DB by GeneID:91181See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 53370.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000271854.3 ENSP00000271854.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000271854.3Link to Ensembl Protein Viewer:ENSP00000271854.3Re-query CCDS DB by Nucleotide ID:ENST00000271854Re-query CCDS DB by Protein ID:ENSP00000271854
Original member Current member NCBI NM_001159484.1 NP_001152956.1 Accepted alive Link to Nucleotide Sequence:NM_001159484.1Link to Protein Sequence:NP_001152956.1Re-query CCDS DB by Nucleotide ID:NM_001159484Re-query CCDS DB by Protein ID:NP_001152956Link to BLAST:NP_001152956.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001152956.1 1736 Q5VU65-2 1736 100% 0 0

Chromosomal Locations for CCDS 53370.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 153992835 153992935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153993015 153993089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153995076 153995180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154009972 154010121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154012244 154012370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154018933 154019069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154022126 154022343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154023122 154023297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154025542 154025716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154027506 154027597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154029896 154030054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154046069 154046200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154046289 154046369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154054228 154054407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154054770 154054832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154056815 154056947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154058089 154058216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154058565 154058693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154060540 154060641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154060942 154061046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154061586 154061674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154070273 154070465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154089421 154089594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154094935 154095156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154099998 154100143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154104012 154104210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154117725 154117880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154118671 154118808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154126323 154126463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154127311 154127417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154129277 154129345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154135814 154135972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154138106 154138238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154139802 154139952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154141431 154141524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154143446 154143577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154152736 154152872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154154842 154155044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5211 nt):
ATGACTGGCTGTCCGGCGTCATCAAGACGCCGAGGCTTCGGGCTCTTTTTCTTCTTGCGTCTACACCGCC
TCCTGTTGTTGTTTCTGGTTTTGCGTGGGACCCTGGCCAACAAACTTAACGTGCCACAGGTGTTGCTACC
CTTCGGCCGAGAGCCAGGCCGGGTGCCTTTCCTGCTGGAGGCCCAGCGGGGCTGCTACACTTGGCATTCC
ACCCATCATGATGCAGTTACTGTTGAGCCTTTATATGAAAATGGCACCTTGTGTTCCCAAAAAGCTGTAC
TCATTGCTGAATCTACGCAACCGATACGCCTCAGCAGTATTATTCTTGCTCGAGAAATAGTGACTGACCA
TGAGCTACGCTGTGATGTTAAGGTTGATGTGATAAACAGCATTGAAATTGTATCTCGGGCCCGGGAACTT
TATGTAGATGATTCGCCACTGGAACTGATGGTGAGGGCATTGGATGCTGAAGGAAATACTTTTAGTAGTT
TGGCAGGGATGATGTTTGAGTGGAGCATTGCCCAGGACAACGAGTCAGCAAGAGAAGAACTGTCTAGCAA
AATTAGGATTCTTAAATACTCCGAAGCAGAATATGCTCCCCCAATATATATAGCTGAGATGGAAAAAGAG
GAGAAACAAGGAGATGTGATTTTAGTGTCTGGGATTAGAACTGGTGCTGCTGTTGTAAAAGTTCGAATTC
ATGAACCATTCTATAAGAAAGTGGCAGCAGCCTTAATACGTCTGCTTGTTTTGGAGAATATATTTCTTAT
ACCATCCCATGATATTTATCTCTTAGTAGGAACATATATTAAATACCAAGTTGCAAAAATGGTTCAAGGG
AGAGTGACAGAGGTGAAATTTCCCCTGGAACATTATATACTGGAATTGCAAGACCATAGAGTTGCACTTA
ACGGGTCTCATTCTGAGAAAGTGGCTATACTGGATGACAAAACAGCCATGGTGACTGCCTCACAACTGGG
CCAGACTAATCTTGTCTTTGTCCATAAAAATGTTCATATGCGATCTGTGTCTGGACTCCCAAATTGCACC
ATATATGTTGTAGAGCCTGGATTTTTAGGTTTCACTGTCCAACCTGGAAACCGATGGAGTCTAGAGGTGG
GACAGGTATATGTCATTACAGTAGACGTCTTTGATAAAAGCAGCACAAAGGTCTATATTTCAGATAATCT
CAGGATTACATACGACTTTCCTAAGGAGTACTTTGAAGAGCAACTAACTACCGTGAATGGATCTTACCAT
ATAGTAAAAGCCCTGAAAGATGGTGTTGTGGTAATAAATGCATCCCTGACCTCCATCATTTACCAGAATA
AAGATATTCAGCCTATAAAATTTCTAATCAAACACCAACAAGAAGTGAAGATTTATTTTCCCATCATGCT
TACACCCAAATTTCTGGCATTTCCTCATCATCCTATGGGAATGTTATATCGTTATAAAGTACAGGTAGAG
GGTGGCAGTGGCAACTTTACCTGGACTTCTTCTAATGAAACAGTGGTCATAGTAACCACGAAAGGAGTGG
TGACTGCAGGTCAGGTCAGGGGGAATAGTACTGTTTTGGCCCGAGATGTACAAAATCCCTTTCGATATGG
AGAAATTAAGATACATGTCCTGAAACTGAACAAAATGGAACTGTTACCATTTCATGCTGATGTGGAGATT
GGCCAGATTATAGAAATACCCATTGCAATGTATCACATAAATAAAGAGACCAAAGAAGCCATGGCATTCA
CAGACTGCTCTCATTTATCCTTGGATCTGAACATGGATAAACAAGGAGTCTTTACTCTTCTCAAAGAAGG
TATTCAAAGACCTGGACCAATGCATTGTTCCAGTACACATATCGCAGCTAAATCTCTTGGCCATACTCTG
GTAACAGTAAGTGTGAATGAATGTGACAAGTACTTGGAGAGCAGTGCTACATTTGCTGCTTATGAACCCC
TAAAGGCTTTAAATCCTGTGGAAGTGGCATTGGTGACATGGCAGTCTGTGAAGGAAATGGTATTTGAAGG
GGGTCCTCGTCCATGGATCTTGGAGCCCTCCCGATTTTTTTTGGAATTGAATGCGGAGAAGACAGAGAAG
ATTGGAATAGCACAAGTGTGGCTGCCATCTAAGAGAAAACAGAACCAGTACATCTACCGGATCCAATGCC
TGGATTTAGGGGAACAAGTTCTCACATTCCGAATTGGAAATCATCCAGGTGTCCTGAACCCTAGTCCAGC
TGTAGAGGTTTTGCAGGTTCGCTTCATTTGTGCCCACCCTGCCAGTATGTCAGTAACTCCAGTATACAAG
GTGCCAGCTGGTGCCCAGCCATGTCCTCTGCCACAGCACAACAAATGGCTGATTCCTGTATCAAGACTGA
GGGACACAGTCCTGGAACTAGCAGTGTTTGATCAACATAGGAGAAAGTTTGATAATTTCAGTTCACTAAT
GCTAGAATGGAAATCCTCCAATGAAACACTAGCCCATTTCGAAGATTATAAATCAGTGGAAATGGTAGCA
AAAGATGATGGCAGTGGGCAGACCCGGTTACATGGTCATCAGATCCTTAAAGTACATCAGATAAAAGGGA
CTGTACTGATTGGAGTCAATTTTGTGGGCTATTCAGAGAAGAAAAGCCCAAAAGAAATTTCCAACTTGCC
CAGATCTGTAGATGTGGAACTGCTCCTGGTAGATGATGTAACTGTAGTGCCTGAGAATGCCACCATCTAT
AACCACCCTGATGTAAAGGAAACATTTAGCCTTGTGGAAGGATCTGGTTATTTTTTAGTCAACAGCAGTG
AGCAGGGTGTTGTCACCATCACTTACATGGAAGCAGAAAGCTCTGTTGAGTTAGTTCCATTACATCCTGG
ATTTTTTACCTTGGAGGTCTATGATCTTTGTTTGGCTTTCTTGGGTCCAGCAACAGCCCACCTCAGGGTG
TCAGACATACAAGAGCTGGAGCTTGATCTGATTGATAAGGTTGAAATAGACAAAACTGTGTTAGTGACTG
TGAGGGTTCTTGGCTCTTCCAAACGCCCATTCCAAAATAAATACTTCAGAAACATGGAACTCAAACTGCA
GTTGGCTTCTGCCATTGTCACCCTGACACCAATGGAGCAACAGGACGAATACTCTGAAAATTATATTCTT
CGAGCTACCACTATTGGGCAAACCACACTTGTGGCTATTGCCAAGGACAAGATGGGAAGAAAATACACAT
CAACTCCTCGGCACATTGAAGTGTTTCCTCCATTCAGACTTCTTCCAGAGAAAATGACACTGATTCCAAT
GAATATGATGCAGGTAATGTCTGAAGGTGGCCCCCAGCCCCAATCCATCGTTCACTTCTCCATCAGTAAT
CAGACCGTGGCTGTTGTTAATAGGAGGGGGCAAGTTACAGGGAAGATTGTTGGCACAGCTGTGGTTCATG
GCACCATCCAGACAGTAAATGAAGATACTGGCAAAGTCATTGTGTTTTCTCAGGATGAAGTACAGATTGA
AGTTGTTCAGCTAAGGGCTGTTAGGATCCTTGCAGCTGCAACTCGGCTCATCACAGCTACCAAGATGCCA
GTTTATGTCATGGGAGTAACCAGTACCCAGACCCCTTTCTCCTTCAGCAATGCTAATCCTGGGCTCACAT
TCCACTGGTCTATGAGCAAAAGGGATGTATTGGATCTAGTGCCCAGGCATTCAGAGGTTTTTCTACAGCT
CCCAGTAGAGCATAACTTTGCCATGGTTGTCCATACAAAAGCAGCAGGCAGGACCAGTATCAAGGTCACT
GTTCACTGCATGAACAGTTCCTCTGGGCAGTTTGAGGGGAATTTGTTGGAACTCTCTGATGAAGTACAGA
TCCTGGTGTTTGAAAAACTCCAACTCTTCTATCCAGAGTGCCAACCAGAGCAGATTCTGATGCCTATAAA
TTCTCAGCTCAAACTCCATACCAACAGGGAAGGAGCTGCCTTCGTGAGTTCTCGTGTTCTCAAGTGTTTC
CCTAATTCATCCGTCATTGAGGAGGATGGTGAAGGGCTCCTGAAAGCTGGTTCCATTGCAGGTACTGCTG
TATTGGAAGTCACTTCTATAGAACCTTTTGGAGTCAACCAAACAACCATAACTGGGGTCCAGGTAGCACC
GGTGACATACCTGCGAGTGAGCAGCCAACCCAAGCTATACACAGCCCAAGGAAGGACCCTGTCAGCATTT
CCCTTGGGCATGTCTCTTACCTTCACTGTTCAGTTTTATAATAGTATCGGAGAGAAATTCCACACACACA
ATACCCAGCTTTATCTGGCTCTGAACAGAGATGACTTGCTGCATATTGGACCAGGGAATAAGAACTATAC
TTACATGGCCCAGGCTGTGAACAGAGGGCTGACACTTGTGGGGCTTTGGGACCGGAGACATCCAGGCATG
GCAGATTATATTCCTGTTGCTGTAGAGCATGCCATTGAGCCAGACACCAAGCTTACCTTTGTTGGAGATA
TCATCTGCTTCAGTACTCACCTTGTCAGCCAGCATGGTGAACCTGGGATATGGATGATTTCTGCCAACAA
TATTCTACAGACAGACATTGTCACTGGAGTAGGAGTGGCCAGGAGTCCGGGGACTGCAATGATTTTTCAT
GACATCCCAGGAGTAGTGAAAACATATCGAGAGGTGGTGGTCAATGCATCATCAAGATTAATGCTCAGTT
ATGACCTCAAGACTTATCTCACCAATACCCTCAATTCAACTGTATTCAAGCTCTTCATCACCACTGGCAG
AAATGGTGTCAATCTTAAAGGATTCTGTACCCCAAACCAGGCCTTGGCCATTACAAAAGTACTTCTTCCA
GCGACCCTCATGCTGTGCCATGTACAGTTCAGTAATACTTTGCTAGACATTCCAGCAAGTAAAGTCTTTC
AGGTCCATTCAGATTTCAGTATGGAGAAAGATCACTGTGAAGATTCCGCCATCCTCAAGCGGTTCACTGG
CTCTTACCAGATCCTGCTCTTGACCCTCTTTGCAGTGCTGGCATCAACAGCTTCCATCTTCCTAGCATAC
AATGCCTTCCTAAACAAGATACAAACAGTTCCAGTTGTGTATGTACCAACTCTAGGAACACCACAGCCAG
GTTTTTTTAACTCCACAAGTTCTCCCCCTCACTTCATGAGTCTACAACCTCCATTGGCCCAAAGTCGGCT
GCAACATTGGTTATGGAGTATAAGGCACTAA

Translation (1736 aa):
MTGCPASSRRRGFGLFFFLRLHRLLLLFLVLRGTLANKLNVPQVLLPFGREPGRVPFLLEAQRGCYTWHS
THHDAVTVEPLYENGTLCSQKAVLIAESTQPIRLSSIILAREIVTDHELRCDVKVDVINSIEIVSRAREL
YVDDSPLELMVRALDAEGNTFSSLAGMMFEWSIAQDNESAREELSSKIRILKYSEAEYAPPIYIAEMEKE
EKQGDVILVSGIRTGAAVVKVRIHEPFYKKVAAALIRLLVLENIFLIPSHDIYLLVGTYIKYQVAKMVQG
RVTEVKFPLEHYILELQDHRVALNGSHSEKVAILDDKTAMVTASQLGQTNLVFVHKNVHMRSVSGLPNCT
IYVVEPGFLGFTVQPGNRWSLEVGQVYVITVDVFDKSSTKVYISDNLRITYDFPKEYFEEQLTTVNGSYH
IVKALKDGVVVINASLTSIIYQNKDIQPIKFLIKHQQEVKIYFPIMLTPKFLAFPHHPMGMLYRYKVQVE
GGSGNFTWTSSNETVVIVTTKGVVTAGQVRGNSTVLARDVQNPFRYGEIKIHVLKLNKMELLPFHADVEI
GQIIEIPIAMYHINKETKEAMAFTDCSHLSLDLNMDKQGVFTLLKEGIQRPGPMHCSSTHIAAKSLGHTL
VTVSVNECDKYLESSATFAAYEPLKALNPVEVALVTWQSVKEMVFEGGPRPWILEPSRFFLELNAEKTEK
IGIAQVWLPSKRKQNQYIYRIQCLDLGEQVLTFRIGNHPGVLNPSPAVEVLQVRFICAHPASMSVTPVYK
VPAGAQPCPLPQHNKWLIPVSRLRDTVLELAVFDQHRRKFDNFSSLMLEWKSSNETLAHFEDYKSVEMVA
KDDGSGQTRLHGHQILKVHQIKGTVLIGVNFVGYSEKKSPKEISNLPRSVDVELLLVDDVTVVPENATIY
NHPDVKETFSLVEGSGYFLVNSSEQGVVTITYMEAESSVELVPLHPGFFTLEVYDLCLAFLGPATAHLRV
SDIQELELDLIDKVEIDKTVLVTVRVLGSSKRPFQNKYFRNMELKLQLASAIVTLTPMEQQDEYSENYIL
RATTIGQTTLVAIAKDKMGRKYTSTPRHIEVFPPFRLLPEKMTLIPMNMMQVMSEGGPQPQSIVHFSISN
QTVAVVNRRGQVTGKIVGTAVVHGTIQTVNEDTGKVIVFSQDEVQIEVVQLRAVRILAAATRLITATKMP
VYVMGVTSTQTPFSFSNANPGLTFHWSMSKRDVLDLVPRHSEVFLQLPVEHNFAMVVHTKAAGRTSIKVT
VHCMNSSSGQFEGNLLELSDEVQILVFEKLQLFYPECQPEQILMPINSQLKLHTNREGAAFVSSRVLKCF
PNSSVIEEDGEGLLKAGSIAGTAVLEVTSIEPFGVNQTTITGVQVAPVTYLRVSSQPKLYTAQGRTLSAF
PLGMSLTFTVQFYNSIGEKFHTHNTQLYLALNRDDLLHIGPGNKNYTYMAQAVNRGLTLVGLWDRRHPGM
ADYIPVAVEHAIEPDTKLTFVGDIICFSTHLVSQHGEPGIWMISANNILQTDIVTGVGVARSPGTAMIFH
DIPGVVKTYREVVVNASSRLMLSYDLKTYLTNTLNSTVFKLFITTGRNGVNLKGFCTPNQALAITKVLLP
ATLMLCHVQFSNTLLDIPASKVFQVHSDFSMEKDHCEDSAILKRFTGSYQILLLTLFAVLASTASIFLAY
NAFLNKIQTVPVVYVPTLGTPQPGFFNSTSSPPHFMSLQPPLAQSRLQHWLWSIRH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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