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Report for CCDS15267.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15267.1 Public Mus musculus 1 Dyrk3 23 108 98 CCDS HistoryNCBI Gene:226419Re-query CCDS DB by CCDS ID:15267.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15267.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000016670.8 ENSMUSP00000016670.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000016670.8Link to Ensembl Protein Viewer:ENSMUSP00000016670.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000016670Re-query CCDS DB by Protein ID:ENSMUSP00000016670
Original member NCBI NM_145508.2 NP_663483.1 Updated not alive Link to Nucleotide Sequence:NM_145508.2Link to Protein Sequence:NP_663483.1Re-query CCDS DB by Nucleotide ID:NM_145508Re-query CCDS DB by Protein ID:NP_663483
Current member NCBI NM_145508.3 NP_663483.1 Accepted alive Link to Nucleotide Sequence:NM_145508.3Link to Protein Sequence:NP_663483.1Re-query CCDS DB by Nucleotide ID:NM_145508Re-query CCDS DB by Protein ID:NP_663483Link to BLAST:NP_663483.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663483.1 586 Q922Y0 586 100% 0 0

Chromosomal Locations for CCDS 15267.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 131128674 131130245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 131136260 131136371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 131138080 131138156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1761 nt):
ATGGGAGGCGCAGCCCGCGATCGCGGGAGGAAGGACGCGGCGCTGCCGGGGGCCGGGCTCCCGCCGCAGC
AGCGGAGGTTGGGGGATGGTGTCTATGATACTTTCATGATGATAGATGAAACCAAGGGCCCACCCTATTC
GGACACATTCAGCAACCCCTCTGAAGCACCTGTCTCCAGAAGGCTAAATATTACCACTGAGCCACTCACG
AGAGGCCACACTCAGCACTTTGTGAATGGAAGTGAGATGAAGGTGGAACAGCTGTTTCAAGAATTTGGCA
ACAGAAGATCCAATACTCTCCAGTCAGATGGCATCAGCAACTCGGAAAAGTCTTCTCCGGCTTCTCAGGG
GAAAAGTTCGGAAAGCCTGAGCGCGGTGAAGTGCAACCTTTCCTCCAGGCCGTCTAAGGTGCTGCCGCTG
ACTCCTGAGCAAGCGCTGAAGCAGTATAAACACCACCTCACTGCCTACGAGAAGCTGGAGATCGTCAGCT
ACCCAGAAATCTACTTTGTGGGTCCGAATGCCAAAAAGCGGCAGGGAGTTATTGGTGGTCCCAATAACGG
TGGCTACGACGATGCGGATGGGGCCTATATTCATGTGCCCCGGGACCATCTGGCTTACCGCTATGAGGTG
CTGAAAATCATCGGCAAGGGGAGTTTTGGACAGGTAGCCCGGGTCTATGATCACAAACTTCGGCAGTACG
TGGCCCTGAAAATGGTGCGCAATGAGAAACGCTTCCATCGCCAGGCGGCCGAGGAGATCCGGATCTTGGA
GCATCTTAAAAAGCAAGACAAAACTGGTAGCATGAACGTCATCCACATGCTAGAAAGTTTCACCTTCCGG
AACCACGTGTGCATGGCCTTTGAACTGCTAAGCATAGACCTGTATGAGCTTATTAAAAAAAACAAGTTCC
AGGGCTTCAGCGTCCAGTTGGTTCGGAAGTTCGCCCAGTCCATCCTACAGTCCCTGGACGCTCTGCACAA
AAACAAGATCATCCACTGCGACCTGAAGCCGGAAAACATTCTCCTGAAACACCACGGCCGAAGCGCCACC
AAGGTCATCGACTTTGGCTCCAGCTGCTTCGAGTATCAGAAGCTTTACACGTATATCCAGTCCCGCTTCT
ACAGAGCCCCAGAGATCATCCTGGGGTGCCGCTACAGCACCCCGATCGACATATGGAGCTTTGGTTGCAT
CCTTGCAGAACTTTTGACAGGACAGCCCCTGTTCCCTGGAGAGGACGAAGGAGACCAGTTGGCCTGCATG
ATAGAGTTGCTAGGAATGCCACCGCAGAAACTTCTGGAGCAATCCAAGCGTGCCAAGTACTTTATTAACT
CCAAAGGCTTGCCTCGATACTGCTCCGTATCTACCCAGACGGACGGGAGGGTGGTGCTTCTCGGGGGTCG
CTCACGCAGGGGTAAAAAGCGAGGCCCGCCAGGCAGCAAAGACTGGGCAACCGCACTGAAGGGCTGTGGT
GACTACTTGTTCATAGAGTTTCTGAAACGATGCCTCCAGTGGGACCCCTCTGCCCGCCTCACCCCGGCTC
AAGCATTAAGACATCCTTGGATTAGCAAGTCTACACCCAAACCTCTCACCATGGACAAGGTGCCAGGGAA
GCGGGTAGTTAACCCTACAAATGCTTTCCAGGGACTGGGTTCCAAGCTGCCTCCAGTCGTTGGGATAGCC
AGTAAGCTTAAAGCTAACCTAATGTCCGAAACCAGTGGTAGTATACCTCTGTGCAGTGTATTGCCAAAGC
TGATTAGCTAG

Translation (586 aa):
MGGAARDRGRKDAALPGAGLPPQQRRLGDGVYDTFMMIDETKGPPYSDTFSNPSEAPVSRRLNITTEPLT
RGHTQHFVNGSEMKVEQLFQEFGNRRSNTLQSDGISNSEKSSPASQGKSSESLSAVKCNLSSRPSKVLPL
TPEQALKQYKHHLTAYEKLEIVSYPEIYFVGPNAKKRQGVIGGPNNGGYDDADGAYIHVPRDHLAYRYEV
LKIIGKGSFGQVARVYDHKLRQYVALKMVRNEKRFHRQAAEEIRILEHLKKQDKTGSMNVIHMLESFTFR
NHVCMAFELLSIDLYELIKKNKFQGFSVQLVRKFAQSILQSLDALHKNKIIHCDLKPENILLKHHGRSAT
KVIDFGSSCFEYQKLYTYIQSRFYRAPEIILGCRYSTPIDIWSFGCILAELLTGQPLFPGEDEGDQLACM
IELLGMPPQKLLEQSKRAKYFINSKGLPRYCSVSTQTDGRVVLLGGRSRRGKKRGPPGSKDWATALKGCG
DYLFIEFLKRCLQWDPSARLTPAQALRHPWISKSTPKPLTMDKVPGKRVVNPTNAFQGLGSKLPPVVGIA
SKLKANLMSETSGSIPLCSVLPKLIS


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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