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Report for CCDS29606.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29606.1 Public Mus musculus 19 Oosp2 23 108 98 CCDS HistoryNCBI Gene:225922Re-query CCDS DB by CCDS ID:29606.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 29606.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000121793.1 ENSMUSP00000113931.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000121793.1Link to Ensembl Protein Viewer:ENSMUSP00000113931.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000121793Re-query CCDS DB by Protein ID:ENSMUSP00000113931
Original member Current member NCBI NM_001037634.3 NP_001032723.1 Accepted alive Link to Nucleotide Sequence:NM_001037634.3Link to Protein Sequence:NP_001032723.1Re-query CCDS DB by Nucleotide ID:NM_001037634Re-query CCDS DB by Protein ID:NP_001032723Link to BLAST:NP_001032723.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001032723.1 168 Q4FZG8 168 100% 0 0

Chromosomal Locations for CCDS 29606.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 11647418 11647562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11649596 11649699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11651478 11651659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11660452 11660527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (507 nt):
ATGGGGGTCTCTATGGCTTTAGAGGTCCTGGTTTATCTTGCTGTCTTGGTTTGGACTTGTGCTTGGGACA
TTGACGTGGATGTAAGTTGTTCTCAGGACTGGATGACGGTCAGTGTTAGTGCGTTTTCCCAGAACAAAAG
AAATCCATATATTTTTGCTGATGAATTATATCTGGGACAGAACTGCCGTGTAACTCAAATACACGCACAT
CAATATGATTTCATATACCCTGTTTCTCACTGTGGCATCAGGACAAAGGTTATCTCAAATGAAATCGTCT
GTTTTGAAACCGAGATGTACTTTCGTCCAAGGAATTATTGTTTGGAACTTCAGATAGTCCCTTTGCAGTG
TTCTGCCTCTCGGAAGTCTGTGTGGCTTATGCCACTATCTACTGAGGAGGATCCAAAACCTGTTAAGAGT
CCCTTTATGACTGACTTTGAAGCTACACCAGAAGAGTTGGGGTTATTAAATGCTCACCAAGCTGCTTCCT
CCCAGAATAAGAGATAG

Translation (168 aa):
MGVSMALEVLVYLAVLVWTCAWDIDVDVSCSQDWMTVSVSAFSQNKRNPYIFADELYLGQNCRVTQIHAH
QYDFIYPVSHCGIRTKVISNEIVCFETEMYFRPRNYCLELQIVPLQCSASRKSVWLMPLSTEEDPKPVKS
PFMTDFEATPEELGLLNAHQAASSQNKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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