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Report for CCDS37914.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37914.1 Public Mus musculus 19 Tkfc 23 108 98 CCDS HistoryNCBI Gene:225913Re-query CCDS DB by CCDS ID:37914.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37914.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000037678.6 ENSMUSP00000044556.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000037678.6Link to Ensembl Protein Viewer:ENSMUSP00000044556.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000037678Re-query CCDS DB by Protein ID:ENSMUSP00000044556
Original member Current member EBI ENSMUST00000236607.1 ENSMUSP00000157520.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000236607.1Link to Ensembl Protein Viewer:ENSMUSP00000157520.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000236607Re-query CCDS DB by Protein ID:ENSMUSP00000157520
Original member Current member EBI ENSMUST00000236950.1 ENSMUSP00000158068.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000236950.1Link to Ensembl Protein Viewer:ENSMUSP00000158068.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000236950Re-query CCDS DB by Protein ID:ENSMUSP00000158068
Original member NCBI NM_145496.1 NP_663471.1 Updated not alive Link to Nucleotide Sequence:NM_145496.1Link to Protein Sequence:NP_663471.1Re-query CCDS DB by Nucleotide ID:NM_145496Re-query CCDS DB by Protein ID:NP_663471
Current member NCBI NM_145496.2 NP_663471.1 Accepted alive Link to Nucleotide Sequence:NM_145496.2Link to Protein Sequence:NP_663471.1Re-query CCDS DB by Nucleotide ID:NM_145496Re-query CCDS DB by Protein ID:NP_663471Link to BLAST:NP_663471.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663471.1 578 Q8VC30 578 100% 0 0

Chromosomal Locations for CCDS 37914.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 10592628 10592789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10593147 10593236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10593326 10593359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10593464 10593567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10593670 10593776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10594431 10594568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10594703 10594822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10595294 10595410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10596012 10596101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10596198 10596282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10596358 10596392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10596932 10597021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10597310 10597388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10599032 10599213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10599308 10599418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10600571 10600760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10604168 10604170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1737 nt):
ATGAGTTCCAAGAAGATGGTGAATTCTGTGGAAGGGTGTGCTGATGATGCCCTTGCTGGGTTAGTAGCCT
CTAACCCTGACTTGCAGCTCCTGCAAGGGCACCGTGTGGCCCTACGTTCTGACCTGGACACCCTCAAGGG
CCGGGTAGCACTTCTGTCAGGTGGAGGCTCAGGCCATGAGCCTGCCCATGCCGGTTTTATCGGGAAAGGG
ATGCTAACAGGTGTCATCGCAGGATCTGTGTTTGCCTCTCCTCCTGTGGGCAGCATCCTGGCAGCCATTA
GAGCTGTGGCCCAGGCAGGCACAGTGGGCACCCTCCTCATTGTGAAGAACTACACTGGGGATCGGCTCAA
CTTTGGACTTGCCATGGAGCAGGCCAAGGCCGAGGGCATCTCTGTGGAGATGGTGATAGTTGAGGATGAC
AGTGCCTTCACCGTCCTCAAGAAGGCAGGCCGGCGTGGCCTGTGTGGCACAGTACTTATCCACAAGGTGG
CAGGTGCTCTGGCTGAGGAAGGAATGGGGCTGGAGGAGATCACAAAGAGGGTGAGCGTGATCGCCAAGAC
CATGGGTACCCTAGGGGTGAGCTTGTCATCCTGCAGTGTCCCTGGCGCCACACACACCTTTGAGCTTGCA
GCTGATGAAATAGAGCTAGGCCTGGGGATCCATGGGGAAGCTGGTGTTCGTCGGATAAAGATAGCACCTG
TTGATCAGATTGTCACTCTTATGCTTGACCACATGACAAACACCTCCAATATATTTCATGTGCCTGTACG
GTCAGGCTCTTCAGTGGTGCTGATAGTCAACAATCTGGGTGGCCTGTCTTTCCTGGAACTGGGCATCATA
GCTGATGCTGCCATACGCTTGCTGGAGGGCCGTGGAGTGAAGGTCGCCCGTGCCCTGGTGGGCACCTTCA
TGTCAGCGCTGGAGATGCCTGGTGTGTCTCTTACTTTGATGCTTGTGGATGAACCCGTGCTGAAGCTAAT
AGATGCTGAAACTACTGCAAAAGCCTGGCCTCACATGGCCAAGGTCTCTGTGACTGGGAGGAAGCGGATT
CGGGCAGCTCCCACAGAGCCTCCAGAAGCCCCTGAAGCCACTGCAGCAGGAGGTGTAACATCAAAGCAGA
TGGCACTTGTGCTGGATCGGATATGCACCACCCTCATCGGACTGGAGGAGCACCTGAATGCCTTGGACAG
GGCTGCTGGTGATGGGGATTGTGGTTCTACCCATAGCCGTGCTGCCAAAGCCATTCAGGGCTGGCTAAAG
GAAGGCCCATCTCTAACCAGCCCTGCCCAGGTACTCTCCAGATTGTCTGTCCTGCTGCTGGAGAGGATGG
GAGGCTCATCTGGGGCGCTCTATGGCCTGTTCCTGACTGCAGCTGCCCAGCCTCTCAAGGCCAAGACTGA
CCTCCCAACCTGGTCTGCTGCCATGGATGCCGGCTTAGAGTCCATGCAGAAGTATGGAAAGGCTGCACCA
GGAGACAGGACAATGCTGGATTCTCTGTGGGCAGCAGCACAGGAGTTCCAAGCCTGGAAGAGCCCAGGGG
CCAGTCTCCTCCCAGTCCTGACTAAAGCAGTCAAGAGTGCTGAAGCTGCAGCCGAGGCCACCAAGAATAT
GGAAGCTGGTGCTGGGAGAGCTAGTTATATCAGCTCTGCACAACTAGATCAGCCAGACCCTGGAGCAGTC
GCAGCTGCTGCCATCTTCCGTGCCATCCTGGAGGTCTTGCAGACGCAGGGAGCATGA

Translation (578 aa):
MSSKKMVNSVEGCADDALAGLVASNPDLQLLQGHRVALRSDLDTLKGRVALLSGGGSGHEPAHAGFIGKG
MLTGVIAGSVFASPPVGSILAAIRAVAQAGTVGTLLIVKNYTGDRLNFGLAMEQAKAEGISVEMVIVEDD
SAFTVLKKAGRRGLCGTVLIHKVAGALAEEGMGLEEITKRVSVIAKTMGTLGVSLSSCSVPGATHTFELA
ADEIELGLGIHGEAGVRRIKIAPVDQIVTLMLDHMTNTSNIFHVPVRSGSSVVLIVNNLGGLSFLELGII
ADAAIRLLEGRGVKVARALVGTFMSALEMPGVSLTLMLVDEPVLKLIDAETTAKAWPHMAKVSVTGRKRI
RAAPTEPPEAPEATAAGGVTSKQMALVLDRICTTLIGLEEHLNALDRAAGDGDCGSTHSRAAKAIQGWLK
EGPSLTSPAQVLSRLSVLLLERMGGSSGALYGLFLTAAAQPLKAKTDLPTWSAAMDAGLESMQKYGKAAP
GDRTMLDSLWAAAQEFQAWKSPGASLLPVLTKAVKSAEAAAEATKNMEAGAGRASYISSAQLDQPDPGAV
AAAAIFRAILEVLQTQGA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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