CCDS
Home
FTP
Process
Releases & Statistics
Collaborators
EBI
HGNC
MGI
NCBI
Contact Us
email CCDS
Genome Displays Related Resources
Gene
HomoloGene
MANE
RefSeq
|
![](/corehtml/transparent.gif) |
Report for CCDS29402.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
29402.1 |
Public |
Mus musculus |
19 |
Ndufs8 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:225887](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:29402.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 19 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 29402.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000075092.7 |
ENSMUSP00000074600.6 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000075092.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000074600.6](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000075092](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000074600](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000235847.1 |
ENSMUSP00000158029.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000235847.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000158029.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000235847](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000158029](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000237341.1 |
ENSMUSP00000158327.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000237341.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000158327.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000237341](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000158327](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000236801.1 |
ENSMUSP00000158541.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000236801.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000158541.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000236801](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000158541](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001271443.1 |
NP_001258372.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001271443.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001258372.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001271443](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001258372](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001258372.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001271444.1 |
NP_001258373.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001271444.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001258373.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001271444](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001258373](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001258373.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_144870.5 |
NP_659119.2 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_144870.5](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_659119.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_144870](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_659119](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_659119.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 29402.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (639 nt): ATGTATCGCCTGAGCTCATCAATGCTGCCACGGGCCTTGGCCCAGGCCATGCGCACAGGACATCTTAATG GACAAAGCCTTCATAGCAGCGCAGTGGCGGCAACGTACAAGTATGTGAATAAGAAGGAACAGGAGTCTGA GGTGGACATGAAGTCCGCAACTGACAATGCAGCTCGGATTCTGATGTGGACAGAACTCATCCGAGGACTG GGCATGACCCTAAGTTACCTCTTTCGAGAGCCTGCCACCATCAACTACCCCTTTGAGAAGGGCCCACTGA GTCCGCGCTTCCGTGGGGAGCATGCACTGCGCCGCTACCCATCTGGAGAGGAGCGTTGCATTGCCTGCAA ACTCTGTGAGGCCATCTGTCCTGCACAGGCCATCACCATTGAGGCTGAGCCAAGAGCCGATGGCAGCCGC CGAACGACACGCTATGACATCGACATGACCAAGTGTATCTACTGTGGTTTCTGCCAGGAAGCCTGCCCTG TTGATGCCATTGTGGAGGGCCCCAACTTCGAGTTCTCCACCGAGACACACGAGGAGTTGCTGTACAACAA GGAGAAGCTACTCAACAATGGAGACAAGTGGGAGGCCGAGATCGCTGCCAACATCCAGGCTGACTACCTG TACCGGTGA
Translation (212 aa): MYRLSSSMLPRALAQAMRTGHLNGQSLHSSAVAATYKYVNKKEQESEVDMKSATDNAARILMWTELIRGL GMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEPRADGSR RTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLNNGDKWEAEIAANIQADYL YR
|