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Report for CCDS26935.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26935.1 Public Mus musculus 14 Glud1 23 108 98 CCDS HistoryNCBI Gene:14661Re-query CCDS DB by CCDS ID:26935.1Re-query CCDS DB by GeneID:14661See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26935.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022322.16 ENSMUSP00000022322.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022322.16Link to Ensembl Protein Viewer:ENSMUSP00000022322.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000022322Re-query CCDS DB by Protein ID:ENSMUSP00000022322
Original member Current member NCBI NM_008133.4 NP_032159.1 Accepted alive Link to Nucleotide Sequence:NM_008133.4Link to Protein Sequence:NP_032159.1Re-query CCDS DB by Nucleotide ID:NM_008133Re-query CCDS DB by Protein ID:NP_032159Link to BLAST:NP_032159.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032159.1 558 P26443 558 100% 0 0

Chromosomal Locations for CCDS 26935.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 34310898 34311342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34319882 34319962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34321768 34321823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34325513 34325576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34329289 34329383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34334112 34334291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34335302 34335439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34336093 34336230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34336496 34336576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34338760 34338883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34339927 34340018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34342119 34342181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34343604 34343723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1677 nt):
ATGTACCGCCGTCTGGGCGAAGCGCTGCTGCTGTCCCGCGCCGGGCCCGCTGCCCTGGGCTCTGCGGCTG
CAGACTCAGCCGCGCTGCTGGGCTGGGCCCGCGGACAGCCCTCCGCCGCCCCGCAACCCGGGCTCACGCC
GGTCGCCCGGCGCCACTACAGCGAAGCGGCCGCCGACCGCGAAGACGACCCCAACTTCTTCAAGATGGTG
GAGGGCTTCTTCGACCGCGGCGCCAGCATCGTAGAGGACAAGCTGGTGGAAGACCTGAAGACCCGGGAGA
GCGAGGAGCAGAAGCGGAACCGGGTGCGCGGCATCCTGAGGATCATCAAGCCCTGCAACCATGTGTTGAG
CCTCTCCTTCCCCATCCGGCGCGACGACGGCTCCTGGGAGGTCATCGAAGGCTACCGGGCCCAGCACAGC
CAGCACCGCACGCCCTGCAAGGGAGGTATCCGTTACAGCACTGACGTGAGTGTGGATGAAGTAAAAGCAC
TGGCTTCCTTAATGACATACAAGTGCGCTGTGGTCGATGTACCGTTTGGAGGTGCTAAAGCAGGCGTTAA
GATCAACCCCAAGAACTATACAGATAATGAATTAGAAAAAATTACACGGAGGTTCACTATGGAGCTGGCC
AAGAAGGGTTTTATTGGTCCTGGCATTGATGTGCCTGCCCCAGACATGAGCACGGGTGAGCGGGAGATGT
CCTGGATCGCTGACACCTATGCCAGCACCATAGGGCACTATGATATCAATGCGCATGCCTGTGTTACTGG
GAAACCCATCAGTCAAGGAGGCATCCACGGGCGCATCTCCGCTACTGGCCGGGGTGTCTTCCATGGAATT
GAAAACTTCATCAATGAGGCTTCTTACATGAGCATTTTAGGAATGACACCAGGCTTTGGCGATAAGACAT
TTGTTGTTCAGGGATTTGGTAATGTGGGCCTGCACTCTATGAGATATTTACATCGTTTTGGTGCTAAATG
TGTTGGTGTTGGAGAGTCTGATGGGAGTATATGGAATCCGGATGGGATTGACCCAAAAGAACTGGAAGAC
TTCAAGTTGCAACATGGATCAATTCTGGGCTTCCCCAAAGCCAAGGTCTATGAAGGAAGCATCTTGGAGG
CTGACTGTGACATTCTGATTCCTGCCGCCAGCGAGAAGCAGTTGACCAAATCCAATGCACCCAGAGTCAA
AGCCAAGATCATTGCTGAAGGTGCCAATGGGCCAACCACTCCAGAGGCTGATAAGATTTTCCTGGAAAGA
AACATCATGGTTATTCCCGATCTCTACTTAAATGCTGGAGGAGTAACAGTGTCTTACTTTGAGTGGCTAA
AGAATCTAAATCATGTCAGCTACGGCCGATTGACCTTCAAATATGAAAGGGACTCTAACTACCACTTGCT
CATGTCTGTTCAAGAGAGTTTAGAGAGAAAGTTTGGAAAGCATGGTGGAACTATTCCTGTGGTCCCCACA
GCAGAGTTCCAGGACAGGATATCGGGTGCATCTGAGAAAGACATTGTGCACTCTGGCTTGGCCTACACAA
TGGAGAGATCTGCCAGGCAAATTATGCGCACAGCCATGAAGTATAACCTGGGATTGGACCTGAGAACAGC
TGCCTATGTCAATGCTATCGAGAAAGTCTTCAAGGTGTACAATGAAGCTGGTGTGACCTTCACATAG

Translation (558 aa):
MYRRLGEALLLSRAGPAALGSAAADSAALLGWARGQPSAAPQPGLTPVARRHYSEAAADREDDPNFFKMV
EGFFDRGASIVEDKLVEDLKTRESEEQKRNRVRGILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHS
QHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELA
KKGFIGPGIDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGI
ENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRFGAKCVGVGESDGSIWNPDGIDPKELED
FKLQHGSILGFPKAKVYEGSILEADCDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTTPEADKIFLER
NIMVIPDLYLNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSNYHLLMSVQESLERKFGKHGGTIPVVPT
AEFQDRISGASEKDIVHSGLAYTMERSARQIMRTAMKYNLGLDLRTAAYVNAIEKVFKVYNEAGVTFT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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