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Report for CCDS9729.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9729.1 Public Homo sapiens 14 AP5M1 24 110 108 CCDS HistoryNCBI Gene:55745Re-query CCDS DB by CCDS ID:9729.1Re-query CCDS DB by GeneID:55745See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9729.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261558.8 ENSP00000261558.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261558.8Link to Ensembl Protein Viewer:ENSP00000261558.3Re-query CCDS DB by Nucleotide ID:ENST00000261558Re-query CCDS DB by Protein ID:ENSP00000261558
Original member Current member NCBI NM_018229.4 NP_060699.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018229.4Link to Protein Sequence:NP_060699.3Re-query CCDS DB by Nucleotide ID:NM_018229Re-query CCDS DB by Protein ID:NP_060699Link to BLAST:NP_060699.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060699.3 490 Q9H0R1-1 490 100% 0 0

Chromosomal Locations for CCDS 9729.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 57269315 57269388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 57274244 57274889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 57280195 57280422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 57282089 57282228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 57282934 57283019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 57283112 57283230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 57286223 57286319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 57288802 57288884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1473 nt):
ATGGCGCAGCGGGCAGTGTGGCTCATAAGCCACGAACCGGGAACTCCACTTTGTGGCACCGTGAGATTCT
CCAGACGGTATCCAACTGTTGAAAAACGAGCCAGAGTCTTCAATGGAGCAAGTTATGTGCCTGTTCCTGA
AGATGGTCCCTTTCTTAAAGCACTGCTCTTTGAACTTAGATTATTGGATGATGATAAAGACTTCGTTGAG
AGTCGTGATAGCTGTTCACGCATCAATAAAACATCCATTTATGGACTCCTGATAGGAGGTGAAGAACTCT
GGCCAGTTGTTGCTTTTCTGAAGAATGACATGATATATGCTTGTGTTCCACTAGTTGAACAAACTCTGTC
CCCTCGTCCGCCACTAATTAGTGTCAGTGGAGTTTCACAAGGCTTTGAATTTCTTTTTGGGATACAGGAT
TTTCTTTATTCAGGTCAAAAAAATGACTCTGAGCTGAATACAAAATTGAGCCAGTTGCCTGACTTGCTTC
TGCAGGCTTGTCCATTTGGTACTTTATTAGATGCCAACTTACAGAATTCATTAGATAATACCAATTTTGC
ATCTGTGACTCAGCCACAGAAACAGCCAGCTTGGAAAACTGGGACGTACAAAGGAAAACCACAAGTTTCT
ATTTCTATCACTGAAAAGGTAAAATCCATGCAATATGATAAACAGGGTATAGCAGATACATGGCAAGTTG
TTGGAACAGTGACTTGCAAGTGTGATTTGGAAGGAATCATGCCAAATGTTACCATCAGCTTGAGTCTCCC
CACCAATGGATCTCCACTTCAGGATATTCTAGTTCACCCTTGTGTAACTTCTCTTGACTCTGCAATTCTG
ACTTCTAGTAGTATTGATGCAATGGATGACTCTGCATTTAGTGGGCCTTACAAATTTCCATTCACTCCAC
CTTTAGAGTCATTCAACTTATGCTTCTACACTTCCCAGGTCCCTGTCCCACCAATTTTGGGTTTTTATCA
AATGAAGGAGGAAGAAGTACAACTAAGAATAACCATTAATTTAAAACTTCATGAAAGTGTGAAAAATAAT
TTTGAATTCTGTGAAGCCCATATACCTTTTTACAATAGAGGTCCAATTACACATTTGGAATACAAAACTA
GTTTTGGCCAGCTTGAAGTATTTCGAGAGAAAAGCTTATTGATCTGGATTATTGGCCAGAAGTTCCCAAA
ATCAATGGAAATTAGTCTTTCTGGAACTGTAACTTTTGGAGCCAAGAGCCATGAGAAGCAGCCATTTGAC
CCAATTTGTACTGGAGAAACAGCATATTTAAAGCTTCATTTTAGGATCTTAGATTACACACTTACTGGAT
GTTATGCAGATCAGCATTCAGTTCAAGTTTTTGCATCAGGAAAACCAAAAATAAGTGCACACCGGAAACT
AATTTCTTCTGATTATTACATCTGGAATTCTAAAGCCCCTGCTCCAGTAACATATGGATCATTATTATTG
TAA

Translation (490 aa):
MAQRAVWLISHEPGTPLCGTVRFSRRYPTVEKRARVFNGASYVPVPEDGPFLKALLFELRLLDDDKDFVE
SRDSCSRINKTSIYGLLIGGEELWPVVAFLKNDMIYACVPLVEQTLSPRPPLISVSGVSQGFEFLFGIQD
FLYSGQKNDSELNTKLSQLPDLLLQACPFGTLLDANLQNSLDNTNFASVTQPQKQPAWKTGTYKGKPQVS
ISITEKVKSMQYDKQGIADTWQVVGTVTCKCDLEGIMPNVTISLSLPTNGSPLQDILVHPCVTSLDSAIL
TSSSIDAMDDSAFSGPYKFPFTPPLESFNLCFYTSQVPVPPILGFYQMKEEEVQLRITINLKLHESVKNN
FEFCEAHIPFYNRGPITHLEYKTSFGQLEVFREKSLLIWIIGQKFPKSMEISLSGTVTFGAKSHEKQPFD
PICTGETAYLKLHFRILDYTLTGCYADQHSVQVFASGKPKISAHRKLISSDYYIWNSKAPAPVTYGSLLL


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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