NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS27552.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27552.1 Public Mus musculus 15 Naprt 23 108 98 CCDS HistoryNCBI Gene:223646Re-query CCDS DB by CCDS ID:27552.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 27552.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023237.7 ENSMUSP00000023237.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023237.7Link to Ensembl Protein Viewer:ENSMUSP00000023237.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000023237Re-query CCDS DB by Protein ID:ENSMUSP00000023237
Original member Current member NCBI NM_172607.3 NP_766195.2 Accepted alive Link to Nucleotide Sequence:NM_172607.3Link to Protein Sequence:NP_766195.2Re-query CCDS DB by Nucleotide ID:NM_172607Re-query CCDS DB by Protein ID:NP_766195Link to BLAST:NP_766195.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766195.2 538 Q8CC86 538 100% 0 0

Chromosomal Locations for CCDS 27552.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 75890998 75891060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75891149 75891256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75891347 75891501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75891580 75891682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75891784 75891864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75891963 75892047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75892342 75892482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75892557 75892753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75893105 75893220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75893306 75893436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75893553 75893635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75893720 75893847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75894017 75894242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1617 nt):
ATGGAGATGGAGCTGGACAGCGAGGGGCGCATGGTGGTGCGGCCGCTGCTCACCGACCTCTATCAGGCTA
CCATGGCGCTGGGCTACTGGCGTGCGGGCCGGGCGTGCGAGGCAGCAGAGTTCGAGCTCTTCTTCCGCCA
CTGCCCTTTCGGAGGCTCCTTCGCCCTTTCCGCTGGCTTGCAGGACTGTATGCGCTTTCTTCGCGCCTTC
CGTCTGCGGGATGCAGATGTGCAGTTCCTGGCTTCGGTACTACCCCCAGACACTGACCCTGCGTTCTTCG
AGCACCTTCGAGCCCTTGATTGCTCTGGGGTGACCGTGCGGGCTCTGCCAGAGGGTTCCCTCGCCTTCCC
TGGTGTGCCGCTTCTGCAGGTGTCCGGGCCTCTTCTTCTGGTACAGCTGCTAGAGACTCCACTGCTGTGT
CTGGTCAGCTACGCTAGCCTCGTAGCCACCAATGCTGCTCGGCTACGCTTGATTGCAGGGCCGGATAAGA
AACTACTAGAGATGGGTTTGCGGCGAGCTCAGGGTCCCGACGGGGGTTTCACGGCCTCAATTTACAGCTA
CCTGGGTGGCTTTGACAGCAGCAGCAACACACTTGCTGGACAACTGAGAGGTGTACCGGTGGCAGGGACC
CTGGCCCACTCCTTTGTCACTTCATTTTCGGGTAGTGAGGTACCCCCCGACCCGATGTTGGCTCCAGCTT
CTAGTGAGGGCCCCACAGTGGACCTGCCTGCCAGGGTAAATTTGTGGCTGAAGCGTGTGTGCCTCTACTT
GGGGCTAGAGGAGCAGGAGCCACACCCAGGGGAGCGCGCAGCATTTGTGGCCTATGCTCTGGCCTTTCCC
CGGGCTTTCCAGGGCCTGCTAGATTCCTACAGTGTACGCAGGAGTGGCCTTCCTAACTTCCTGGCAGTAG
CCCTGGCACTGGGGGAGCTTGGCTACAGAGCAGTGGGTGTGAGGCTGGACAGCGGTGACCTGCTTCAGCA
GGCTAAAGAGATCCGTGGCATCTTTCGAACTGCTGGTGCCCAATTCCAGATGCCCTGGCTAGAGTCTGTT
CCCATTGCAGTCAGCAACAACATTGACGAGAGTGAGCTGATGAGGCTAGCCCAGAAGGGCAGTGAGGTGA
ATGTCATTGGCATTGGCACCAGTGTGGTCACTTGTCCCAAACAGCCTTCTATGGGCTGTGTCTACAAGCT
GGTGTCTGTAGGAGGCCAGCCTCGAATCAAGCTGACAGAGGACCCTGAGAAGCAAACACTGCCAGGGAGC
AAGGCTGCCTTCCGGTTCCTAGGCCCCGATGGGTCTTTGCTACTGGACCTACTGCAGTTAGCAGAAGAGC
CCCCGCCCAAGGCTGGGCAGGAACTGAGGGTTTGGCCTCGGGGGACCCAGGAGCCCTGCACTGTGAAGCC
AGCCCAAGTGGAGCCATTGCTGCGACTCTACCTGCAACAGGGACAGCTGTGTGAGCCACTGCCATCTCTG
GATGAGTCCAGACGCTTTGCCCAGCAGTCCCTGAGCCTCCTCCGCCCTGCACATAAGCAGCTGCAGAGCC
CTGCAGTGTATCCGGTCGCACTGTCAGAGAAGCTTCGGGCACTGGTGGACAGTTTGAGTGCTCGAGGTCC
CCTGTGA

Translation (538 aa):
MEMELDSEGRMVVRPLLTDLYQATMALGYWRAGRACEAAEFELFFRHCPFGGSFALSAGLQDCMRFLRAF
RLRDADVQFLASVLPPDTDPAFFEHLRALDCSGVTVRALPEGSLAFPGVPLLQVSGPLLLVQLLETPLLC
LVSYASLVATNAARLRLIAGPDKKLLEMGLRRAQGPDGGFTASIYSYLGGFDSSSNTLAGQLRGVPVAGT
LAHSFVTSFSGSEVPPDPMLAPASSEGPTVDLPARVNLWLKRVCLYLGLEEQEPHPGERAAFVAYALAFP
RAFQGLLDSYSVRRSGLPNFLAVALALGELGYRAVGVRLDSGDLLQQAKEIRGIFRTAGAQFQMPWLESV
PIAVSNNIDESELMRLAQKGSEVNVIGIGTSVVTCPKQPSMGCVYKLVSVGGQPRIKLTEDPEKQTLPGS
KAAFRFLGPDGSLLLDLLQLAEEPPPKAGQELRVWPRGTQEPCTVKPAQVEPLLRLYLQQGQLCEPLPSL
DESRRFAQQSLSLLRPAHKQLQSPAVYPVALSEKLRALVDSLSARGPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH