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Report for CCDS44732.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44732.1 Public Homo sapiens 11 PLET1 24 110 108 CCDS HistoryNCBI Gene:349633Re-query CCDS DB by CCDS ID:44732.1Re-query CCDS DB by GeneID:349633See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 44732.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000338832.4 ENSP00000341412.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000338832.4Link to Ensembl Protein Viewer:ENSP00000341412.2Re-query CCDS DB by Nucleotide ID:ENST00000338832Re-query CCDS DB by Protein ID:ENSP00000341412
Original member Current member NCBI NM_001145024.1 NP_001138496.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001145024.1Link to Protein Sequence:NP_001138496.1Re-query CCDS DB by Nucleotide ID:NM_001145024Re-query CCDS DB by Protein ID:NP_001138496Link to BLAST:NP_001138496.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138496.1 207 Q6UQ28 207 100% 0 0

Chromosomal Locations for CCDS 44732.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 112248799 112248974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112252348 112252409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112255388 112255589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112260406 112260589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (624 nt):
ATGGCAGTCTTCCATGACATGCTGCTGCAGCCACTGGGGATGTTTCTGTGCCTCAGTCTGCAGCTTTCTT
CTGCCACCTTTATAAGGTACAGTAGCACCTGCTTCACCTTTGATGAATACTACACCATAACCCTAGACAT
CAAGGCCAGTTCACATATCTACGAAAGCAATGCAGTCTATTCTGTATTTGTTCCCGTGAATGACAGCGTC
TATGCTGTGGTCATGAAAACCTTGGACGAGAACAGTGACTCAGCGGGCCTCTGGCAAAGAGCGGATAAAA
ATTGCTACAGCAACTCCACGTATTACGTGAAAGATCAATACATGACGGTCTTAGAGGCACAGTGGCAAGC
TCCTGAACCTGAGAACATAACTGAAGTGGAGATACAAGCTTTCACTGTCCAGATCAGAGCGCTGCCTATA
CTTTCTACTCTGAAGCTAAGAGAAAAACTGTCAACCTTAGCCTTAGCTGCCAAGATTCCCCAGAGCTCAG
CCTTCAAGCCTTTCTTCATGATTACACCCAAGAGTATCAGACTCGAAGGCTTGGCCAACCAAGTCTTCAG
CAGCCCCATCACAGAGGCCATTTATATCCTGCTTGCTTTTCTCACCAGCACACTTCTCTTCTAA

Translation (207 aa):
MAVFHDMLLQPLGMFLCLSLQLSSATFIRYSSTCFTFDEYYTITLDIKASSHIYESNAVYSVFVPVNDSV
YAVVMKTLDENSDSAGLWQRADKNCYSNSTYYVKDQYMTVLEAQWQAPEPENITEVEIQAFTVQIRALPI
LSTLKLREKLSTLALAAKIPQSSAFKPFFMITPKSIRLEGLANQVFSSPITEAIYILLAFLTSTLLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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