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Report for CCDS21547.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21547.1 Public Mus musculus 7 Or51f5 23 108 98 CCDS HistoryNCBI Gene:259096Re-query CCDS DB by CCDS ID:21547.1Re-query CCDS DB by GeneID:259096See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21547.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098217.2 ENSMUSP00000095819.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098217.2Link to Ensembl Protein Viewer:ENSMUSP00000095819.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000098217Re-query CCDS DB by Protein ID:ENSMUSP00000095819
Original member Current member EBI ENSMUST00000213432.1 ENSMUSP00000150963.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000213432.1Link to Ensembl Protein Viewer:ENSMUSP00000150963.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000213432Re-query CCDS DB by Protein ID:ENSMUSP00000150963
Original member Current member NCBI NM_147092.1 NP_667303.1 Accepted alive Link to Nucleotide Sequence:NM_147092.1Link to Protein Sequence:NP_667303.1Re-query CCDS DB by Nucleotide ID:NM_147092Re-query CCDS DB by Protein ID:NP_667303Link to BLAST:NP_667303.1

Chromosomal Locations for CCDS 21547.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 102774526 102775470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGCCATCCTTCAACGAGAGCACTGCCTACCCACCAGTCTTCTTCCTCACTGGCATTCCTGGTCTTGAGA
CCTCTCACACCTGGATCTCCATCCCTTTCTGTTGTCTGTATGCCATTGCCATCTCTGGGAACAGCATGAT
CCTCTTTGTCATCATCACTGAGTCAAGCCTCCATGAACCCATGTACTATTTCCTGTCCATGCTGTCCTTC
ACAGACCTAGGTCTATGCCTTTCAACATTGGTAACTGTGTTGGGCATCTTCTGGTTTAATGTTCGAGAAA
TTAGCTTCGATGCATGCATTGGCCAAATGTTCTTTATCCATGGCTTTACATTCATGGAATCTTCAGTCCT
CCTGGTGATGGCCTTTGATCGATTTATTGCCATCTGTAACCCACTGAGGTATGCTATGATCTTAACCAAT
TCTCGAATCATTGCAGTGGGTTTTGCAATCATAATTAGGGGAACCACCGCTCTTGTTCCTTTACTCCTGC
TCCTCAAGCGTCTGTCTTTTTGCCGGAGTCATGTGCTGCATCATTCCTACTGCTTCCATCCTGATGTGAT
GAAGCTTTCATGTTCAGATACCAGGATCAATAGTGCCTTTGGCTTGGCCATTGTCATCTCTACTGCAGGC
TTGGACTCTGTCTTGATCCTTCTCTCCTATGTTCTAATCATCCATTCTGTCCTTTGCATTGCATCCAAGG
AGGAGCGGAAAAAGGCGTTTGGTACCTGTGTCTCCCACCTCAGTGCTGTTGCCATCTTCTACATTCCTAT
GATCAGCCTGTCATTGGTGCACAGATTTGGGAAACATGCCCCTCCCTTTGTGCACACTCTAATTGCCAAT
GTTTATCTGCTCATTCCTCCGGTAATGAATCCCATAATCTATAGTGTGAAAACCAAACAAATTCGCAAGG
CCATGCTGAAAGTATTTTTTGTTAAGCCATCTTAG

Translation (314 aa):
MPSFNESTAYPPVFFLTGIPGLETSHTWISIPFCCLYAIAISGNSMILFVIITESSLHEPMYYFLSMLSF
TDLGLCLSTLVTVLGIFWFNVREISFDACIGQMFFIHGFTFMESSVLLVMAFDRFIAICNPLRYAMILTN
SRIIAVGFAIIIRGTTALVPLLLLLKRLSFCRSHVLHHSYCFHPDVMKLSCSDTRINSAFGLAIVISTAG
LDSVLILLSYVLIIHSVLCIASKEERKKAFGTCVSHLSAVAIFYIPMISLSLVHRFGKHAPPFVHTLIAN
VYLLIPPVMNPIIYSVKTKQIRKAMLKVFFVKPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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