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Report for CCDS11119.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11119.1 Public Homo sapiens 17 WRAP53 24 110 108 CCDS HistoryNCBI Gene:55135Re-query CCDS DB by CCDS ID:11119.1Re-query CCDS DB by GeneID:55135See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11119.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000316024.9 ENSP00000324203.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000316024.9Link to Ensembl Protein Viewer:ENSP00000324203.5Re-query CCDS DB by Nucleotide ID:ENST00000316024Re-query CCDS DB by Protein ID:ENSP00000324203
Original member Current member EBI ENST00000396463.7 ENSP00000379727.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000396463.7Link to Ensembl Protein Viewer:ENSP00000379727.3Re-query CCDS DB by Nucleotide ID:ENST00000396463Re-query CCDS DB by Protein ID:ENSP00000379727
Original member Current member EBI ENST00000431639.6 ENSP00000397219.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000431639.6Link to Ensembl Protein Viewer:ENSP00000397219.2Re-query CCDS DB by Nucleotide ID:ENST00000431639Re-query CCDS DB by Protein ID:ENSP00000397219
Original member Current member EBI ENST00000457584.6 ENSP00000411061.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000457584.6Link to Ensembl Protein Viewer:ENSP00000411061.2Re-query CCDS DB by Nucleotide ID:ENST00000457584Re-query CCDS DB by Protein ID:ENSP00000411061
Original member Current member NCBI NM_001143990.2 NP_001137462.1 Accepted alive Link to Nucleotide Sequence:NM_001143990.2Link to Protein Sequence:NP_001137462.1Re-query CCDS DB by Nucleotide ID:NM_001143990Re-query CCDS DB by Protein ID:NP_001137462Link to BLAST:NP_001137462.1
Original member Current member NCBI NM_001143991.2 NP_001137463.1 Accepted alive Link to Nucleotide Sequence:NM_001143991.2Link to Protein Sequence:NP_001137463.1Re-query CCDS DB by Nucleotide ID:NM_001143991Re-query CCDS DB by Protein ID:NP_001137463Link to BLAST:NP_001137463.1
Original member Current member NCBI NM_001143992.2 NP_001137464.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001143992.2Link to Protein Sequence:NP_001137464.1Re-query CCDS DB by Nucleotide ID:NM_001143992Re-query CCDS DB by Protein ID:NP_001137464Link to BLAST:NP_001137464.1
Original member Current member NCBI NM_018081.2 NP_060551.2 Accepted alive Link to Nucleotide Sequence:NM_018081.2Link to Protein Sequence:NP_060551.2Re-query CCDS DB by Nucleotide ID:NM_018081Re-query CCDS DB by Protein ID:NP_060551Link to BLAST:NP_060551.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001137462.1 548 Q9BUR4 548 100% 0 0
NP_001137463.1 548 Q9BUR4 548 100% 0 0
NP_001137464.1 548 Q9BUR4 548 100% 0 0
NP_060551.2 548 Q9BUR4 548 100% 0 0

Chromosomal Locations for CCDS 11119.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 7688649 7689079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7689224 7689322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7689590 7689701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7700741 7700829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7701459 7701549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7701657 7701789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7702344 7702552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7702743 7702846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7702993 7703127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7703243 7703486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1647 nt):
ATGAAGACTTTGGAGACTCAACCGTTAGCTCCGGACTGCTGTCCTTCAGACCAGGACCCAGCTCCAGCCC
ATCCTTCTCCCCACGCTTCCCCGATGAATAAAAATGCGGACTCTGAACTGATGCCACCGCCTCCCGAAAG
GGGGGATCCGCCCCGGTTGTCCCCAGATCCTGTGGCTGGCTCAGCTGTGTCCCAGGAGCTACGGGAGGGG
GACCCAGTTTCTCTCTCCACTCCCCTGGAAACAGAGTTTGGTTCCCCTAGTGAGTTGAGTCCTCGAATCG
AGGAGCAAGAACTTTCTGAAAATACAAGCCTTCCTGCAGAAGAAGCAAACGGGAGCCTTTCTGAAGAAGA
AGCGAACGGGCCAGAGTTGGGGTCTGGAAAAGCCATGGAAGATACCTCTGGGGAACCCGCTGCAGAGGAC
GAGGGAGACACCGCTTGGAACTACAGCTTCTCCCAGCTGCCTCGATTTCTCAGTGGTTCCTGGTCAGAGT
TCAGCACCCAACCTGAGAACTTCTTGAAAGGCTGTAAGTGGGCTCCTGACGGTTCCTGCATCTTGACCAA
TAGTGCTGATAACATCTTGCGAATTTATAACCTGCCCCCAGAGCTGTACCATGAGGGGGAGCAGGTGGAA
TATGCAGAAATGGTCCCTGTCCTTCGAATGGTGGAAGGTGATACCATCTATGATTACTGCTGGTATTCTC
TGATGTCCTCAGCCCAGCCAGACACCTCCTACGTGGCCAGCAGCAGCCGGGAGAACCCGATTCATATCTG
GGACGCATTCACTGGAGAGCTCCGGGCTTCCTTTCGCGCCTACAACCACCTGGATGAGCTGACGGCAGCC
CATTCGCTCTGCTTCTCCCCGGATGGCTCCCAGCTCTTCTGTGGCTTCAACCGGACTGTGCGTGTTTTTT
CCACGGCCCGGCCTGGCCGAGACTGCGAGGTCCGAGCCACATTTGCAAAAAAGCAGGGCCAGAGCGGCAT
CATCTCCTGCATAGCCTTCAGCCCAGCCCAGCCCCTCTATGCCTGTGGCTCCTACGGCCGCTCCCTGGGT
CTGTATGCCTGGGATGATGGCTCCCCTCTCGCCTTGCTGGGAGGGCACCAAGGGGGCATCACCCACCTCT
GCTTTCATCCCGATGGCAACCGCTTCTTCTCAGGAGCCCGCAAGGATGCTGAGCTCCTGTGCTGGGATCT
CCGGCAGTCTGGTTACCCACTGTGGTCCCTGGGTCGAGAGGTGACCACCAATCAGCGCATCTACTTCGAT
CTGGACCCGACCGGGCAGTTCCTAGTGAGTGGCAGCACGAGCGGGGCTGTCTCTGTGTGGGACACGGACG
GGCCTGGCAATGATGGGAAGCCGGAGCCCGTGTTGAGTTTTCTGCCCCAGAAGGACTGCACCAATGGCGT
GAGCCTGCACCCTAGCCTGCCTCTCCTGGCCACTGCCTCCGGTCAGCGTGTGTTTCCTGAGCCCACAGAG
AGTGGGGACGAAGGAGAGGAGCTGGGCCTTCCCTTGCTCTCCACGCGCCACGTCCACCTTGAATGTCGGC
TTCAGCTCTGGTGGTGTGGGGGGGCGCCAGACTCCAGCATCCCTGATGATCACCAGGGCGAGAAAGGGCA
GGGAGGAACGGAGGGAGGTGTGGGTGAGCTGATATAA

Translation (548 aa):
MKTLETQPLAPDCCPSDQDPAPAHPSPHASPMNKNADSELMPPPPERGDPPRLSPDPVAGSAVSQELREG
DPVSLSTPLETEFGSPSELSPRIEEQELSENTSLPAEEANGSLSEEEANGPELGSGKAMEDTSGEPAAED
EGDTAWNYSFSQLPRFLSGSWSEFSTQPENFLKGCKWAPDGSCILTNSADNILRIYNLPPELYHEGEQVE
YAEMVPVLRMVEGDTIYDYCWYSLMSSAQPDTSYVASSSRENPIHIWDAFTGELRASFRAYNHLDELTAA
HSLCFSPDGSQLFCGFNRTVRVFSTARPGRDCEVRATFAKKQGQSGIISCIAFSPAQPLYACGSYGRSLG
LYAWDDGSPLALLGGHQGGITHLCFHPDGNRFFSGARKDAELLCWDLRQSGYPLWSLGREVTTNQRIYFD
LDPTGQFLVSGSTSGAVSVWDTDGPGNDGKPEPVLSFLPQKDCTNGVSLHPSLPLLATASGQRVFPEPTE
SGDEGEELGLPLLSTRHVHLECRLQLWWCGGAPDSSIPDDHQGEKGQGGTEGGVGELI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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