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Report for CCDS7166.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7166.1 Public Homo sapiens 10 MAP3K8 24 110 108 CCDS HistoryNCBI Gene:1326Re-query CCDS DB by CCDS ID:7166.1Re-query CCDS DB by GeneID:1326See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7166.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263056.6 ENSP00000263056.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263056.6Link to Ensembl Protein Viewer:ENSP00000263056.1Re-query CCDS DB by Nucleotide ID:ENST00000263056Re-query CCDS DB by Protein ID:ENSP00000263056
Original member Current member EBI ENST00000375321.1 ENSP00000364470.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375321.1Link to Ensembl Protein Viewer:ENSP00000364470.1Re-query CCDS DB by Nucleotide ID:ENST00000375321Re-query CCDS DB by Protein ID:ENSP00000364470
Original member Current member EBI ENST00000542547.5 ENSP00000443610.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000542547.5Link to Ensembl Protein Viewer:ENSP00000443610.1Re-query CCDS DB by Nucleotide ID:ENST00000542547Re-query CCDS DB by Protein ID:ENSP00000443610
Original member Current member NCBI NM_001244134.1 NP_001231063.1 Accepted alive Link to Nucleotide Sequence:NM_001244134.1Link to Protein Sequence:NP_001231063.1Re-query CCDS DB by Nucleotide ID:NM_001244134Re-query CCDS DB by Protein ID:NP_001231063Link to BLAST:NP_001231063.1
Original member Current member NCBI NM_001320961.2 NP_001307890.1 Accepted alive Link to Nucleotide Sequence:NM_001320961.2Link to Protein Sequence:NP_001307890.1Re-query CCDS DB by Nucleotide ID:NM_001320961Re-query CCDS DB by Protein ID:NP_001307890Link to BLAST:NP_001307890.1
Original member Current member NCBI NM_005204.4 NP_005195.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005204.4Link to Protein Sequence:NP_005195.2Re-query CCDS DB by Nucleotide ID:NM_005204Re-query CCDS DB by Protein ID:NP_005195Link to BLAST:NP_005195.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001231063.1 467 P41279-1 467 100% 0 0
NP_001307890.1 467 P41279-1 467 100% 0 0
NP_005195.2 467 P41279-1 467 100% 0 0

Chromosomal Locations for CCDS 7166.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 30438939 30439274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 30447782 30447949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 30450258 30450519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 30451638 30451744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 30458084 30458236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 30459255 30459501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 30460706 30460836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1404 nt):
ATGGAGTACATGAGCACTGGAAGTGACAATAAAGAAGAGATTGATTTATTAATTAAACATTTAAATGTGT
CTGATGTAATAGACATTATGGAAAATCTTTATGCAAGTGAAGAGCCAGCAGTTTATGAACCCAGTCTAAT
GACCATGTGTCAAGACAGTAATCAAAACGATGAGCGTTCTAAGTCTCTGCTGCTTAGTGGCCAAGAGGTA
CCATGGTTGTCATCAGTCAGATATGGAACTGTGGAGGATTTGCTTGCTTTTGCAAACCATATATCCAACA
CTGCAAAGCATTTTTATGGACAACGACCACAGGAATCTGGAATTTTATTAAACATGGTCATCACTCCCCA
AAATGGACGTTACCAAATAGATTCCGATGTTCTCCTGATCCCCTGGAAGCTGACTTACAGGAATATTGGT
TCTGATTTTATTCCTCGGGGCGCCTTTGGAAAGGTATACTTGGCACAAGATATAAAGACGAAGAAAAGAA
TGGCGTGTAAACTGATCCCAGTAGATCAATTTAAGCCATCTGATGTGGAAATCCAGGCTTGCTTCCGGCA
CGAGAACATCGCAGAGCTGTATGGCGCAGTCCTGTGGGGTGAAACTGTCCATCTCTTTATGGAAGCAGGC
GAGGGAGGGTCTGTTCTGGAGAAACTGGAGAGCTGTGGACCAATGAGAGAATTTGAAATTATTTGGGTGA
CAAAGCATGTTCTCAAGGGACTTGATTTTCTACACTCAAAGAAAGTGATCCATCATGATATTAAACCTAG
CAACATTGTTTTCATGTCCACAAAAGCTGTTTTGGTGGATTTTGGCCTAAGTGTTCAAATGACCGAAGAT
GTCTATTTTCCTAAGGACCTCCGAGGAACAGAGATTTACATGAGCCCAGAGGTCATCCTGTGCAGGGGCC
ATTCAACCAAAGCAGACATCTACAGCCTGGGGGCCACGCTCATCCACATGCAGACGGGCACCCCACCCTG
GGTGAAGCGCTACCCTCGCTCAGCCTATCCCTCCTACCTGTACATAATCCACAAGCAAGCACCTCCACTG
GAAGACATTGCAGATGACTGCAGTCCAGGGATGAGAGAGCTGATAGAAGCTTCCCTGGAGAGAAACCCCA
ATCACCGCCCAAGAGCCGCAGACCTACTAAAACATGAGGCCCTGAACCCGCCCAGAGAGGATCAGCCACG
CTGTCAGAGTCTGGACTCTGCCCTCTTGGAGCGCAAGAGGCTGCTGAGTAGGAAGGAGCTGGAACTTCCT
GAGAACATTGCTGATTCTTCGTGCACAGGAAGCACCGAGGAATCTGAGATGCTCAAGAGGCAACGCTCTC
TCTACATCGACCTCGGCGCTCTGGCTGGCTACTTCAATCTTGTTCGGGGACCACCAACGCTTGAATATGG
CTGA

Translation (467 aa):
MEYMSTGSDNKEEIDLLIKHLNVSDVIDIMENLYASEEPAVYEPSLMTMCQDSNQNDERSKSLLLSGQEV
PWLSSVRYGTVEDLLAFANHISNTAKHFYGQRPQESGILLNMVITPQNGRYQIDSDVLLIPWKLTYRNIG
SDFIPRGAFGKVYLAQDIKTKKRMACKLIPVDQFKPSDVEIQACFRHENIAELYGAVLWGETVHLFMEAG
EGGSVLEKLESCGPMREFEIIWVTKHVLKGLDFLHSKKVIHHDIKPSNIVFMSTKAVLVDFGLSVQMTED
VYFPKDLRGTEIYMSPEVILCRGHSTKADIYSLGATLIHMQTGTPPWVKRYPRSAYPSYLYIIHKQAPPL
EDIADDCSPGMRELIEASLERNPNHRPRAADLLKHEALNPPREDQPRCQSLDSALLERKRLLSRKELELP
ENIADSSCTGSTEESEMLKRQRSLYIDLGALAGYFNLVRGPPTLEYG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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