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Report for CCDS31701.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31701.2 Under review, update Homo sapiens 11 OR10S1 24 110 108 CCDS HistoryNCBI Gene:219873Re-query CCDS DB by CCDS ID:31701.2See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 31701.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000641123.1 ENSP00000493143.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641123.1Link to Ensembl Protein Viewer:ENSP00000493143.1Re-query CCDS DB by Nucleotide ID:ENST00000641123Re-query CCDS DB by Protein ID:ENSP00000493143
Original member Current member NCBI NM_001004474.2 NP_001004474.2 MANE Select Pending alive Link to Nucleotide Sequence:NM_001004474.2Link to Protein Sequence:NP_001004474.2Re-query CCDS DB by Nucleotide ID:NM_001004474Re-query CCDS DB by Protein ID:NP_001004474Link to BLAST:NP_001004474.2

Chromosomal Locations for CCDS 31701.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 123976696 123977664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (969 nt):
ATGACCATGACAACGGAGAACCCCAACCAGACTGTGGTGAGCCACTTCTTCCTGGAGGGTTTGAGGTACA
CCGCTAAACATTCTAGCCTCTTCTTCCTCCTCTTCCTCCTCATCTACAGCATCACTGTGGCTGGGAATCT
CCTCATCCTCCTAACTGTGGGCTCTGACTCTCACCTCAGCTTACCCATGTACCACTTCCTGGGGCACCTC
TCCTTCCTGGATGCCTGTTTGTCTACAGTGACAGTGCCCAAGGTCATGGCAGGCCTGCTGACTCTGGATG
GGAAGGTGATCTCCTTTGAGGGCTGTGCCGTACAGCTTTATTGCTTCCACTTTCTGGCCAGCACTGAGTG
CTTCCTGTACACAGTCATGGCCTATGACCGCTATCTGGCTATCTGTCAACCCCTGCACTACCCAGTGGCC
ATGAACAGAAGGATGTGTGCAGAAATGGCTGGAATCACCTGGGCCATAGGTGCCACGCACGCTGCAATCC
ACACCTCCCTCACCTTCCGCCTGCTCTACTGTGGGCCTTGCCACATTGCCTACTTCTTCTGCGACATACC
CCCTGTCCTAAAGCTCGCCTGTACAGACACCACCATTAATGAGCTAGTCATGCTTGCCAGCATTGGCATC
GTGGCTGCAGGCTGCCTCATCCTCATCGTTATTTCCTACATCTTCATCGTGGCAGCTGTGTTGCGCATCC
GCACAGCCCAGGGCCGGCAGCGGGCCTTCTCCCCCTGCACTGCCCAGCTCACTGGGGTGCTCCTGTACTA
CGTGCCACCTGTCTGTATCTACCTGCAGCCTCGCTCCAGTGAGGCAGGAGCTGGGGCCCCTGCTGTCTTC
TACACAATCGTAACTCCAATGCTCAACCCATTCATTTACACTTTGCGGAACAAGGAGGTGAAGCATGCTC
TGCAAAGGCTTTTGTGCAGCAGCTTCCGAGAGTCTACAGCAGGCAGCCCACCCCCATAG

Translation (322 aa):
MTMTTENPNQTVVSHFFLEGLRYTAKHSSLFFLLFLLIYSITVAGNLLILLTVGSDSHLSLPMYHFLGHL
SFLDACLSTVTVPKVMAGLLTLDGKVISFEGCAVQLYCFHFLASTECFLYTVMAYDRYLAICQPLHYPVA
MNRRMCAEMAGITWAIGATHAAIHTSLTFRLLYCGPCHIAYFFCDIPPVLKLACTDTTINELVMLASIGI
VAAGCLILIVISYIFIVAAVLRIRTAQGRQRAFSPCTAQLTGVLLYYVPPVCIYLQPRSSEAGAGAPAVF
YTIVTPMLNPFIYTLRNKEVKHALQRLLCSSFRESTAGSPPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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