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Report for CCDS26053.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26053.1 Public Mus musculus 12 Eif2b2 23 108 98 CCDS HistoryNCBI Gene:217715Re-query CCDS DB by CCDS ID:26053.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26053.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000004910.11 ENSMUSP00000004910.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000004910.11Link to Ensembl Protein Viewer:ENSMUSP00000004910.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000004910Re-query CCDS DB by Protein ID:ENSMUSP00000004910
Original member Current member NCBI NM_145445.4 NP_663420.1 Accepted alive Link to Nucleotide Sequence:NM_145445.4Link to Protein Sequence:NP_663420.1Re-query CCDS DB by Nucleotide ID:NM_145445Re-query CCDS DB by Protein ID:NP_663420Link to BLAST:NP_663420.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663420.1 351 Q99LD9 351 100% 0 0

Chromosomal Locations for CCDS 26053.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 85219562 85219724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 85219822 85219942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 85220097 85220245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 85221477 85221640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 85222744 85222839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 85223381 85223518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 85224555 85224621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 85226003 85226160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1056 nt):
ATGCCGGGTGCCGCGGCGAAGGGCTCGGAGTTGTCCGAGAGGATCGAAGGCTTCGTGGAGACTCTGAAGC
GAGGTGGCGGGCAGCGCAGCTCGGAGGACATGGCTCGGGAGACCCTGGGGCTGCTGCGCCGGCTTATCAC
GGACCACCACTGGAACAACGCGGGGGACCTTATGGATTTGATCCGCAGAGAGGGCAGGAGGATGACGGCT
GCGCAGCCCTCCGAGACCACCGTGGGAAATATGGTGCGGAGAGTCCTCAAGATCATCCGGGAGGAGTATG
GCAGACTGCACGGGCGCAGTGACGAGAGCGATCAGCAGGAGTCCCTGCACAAACTCTTGACATCCGGAGG
CCTGAGCGAGGATTTCAGCTTCCATTTTGCCCCACTTAAGGCCAACATCATTGAGGCGATTAATGAGCTG
CTGGTGGAACTGGAAGGCACAATGGAGAACATTGCCGCCCAGGCTCTGGAGCACATCCACTCCAACGAGG
TGATCATGACCATTGGCTACTCTAGGACAGTTGAGGCCTTCCTTAAAGAGGCGGCCCGGAAGAGGAAGTT
CCACGTTATTGTTGCAGAGTGCGCTCCTTTCTGCCAGGGACATGAAATGGCCGTCAATTTGTCCAAAGAA
GGTATCGAGACAACTGTCATGACTGATGCCGCCATTTTTGCTGTTATGTCGAGAGTCAACAAGGTGATCA
TTGGCACGAAGACTATCCTGGCCAACGGTTCCCTGAGGGCAGTGGCAGGAACACACACCCTGGCCCTGGC
AGCGAAACACCACTCCACGCCTCTCATCGTCTGCGCCCCCATGTTTAAGCTGTCCCCTCAGTTCCCCAGT
GAAGAAGATTCCTTTCACAAGTTTGTGGCTCCTGAAGAAGTCCTTCCTTTCACAGAAGGAGACATTCTGG
AGAAGGTCAGCGTCCACTGTCCTGTGTTTGACTACGTGCCCCCCGACCTCATTACCCTCTTTATCTCCAA
CATTGGCGGGAACGCACCATCCTACATCTACCGCCTGATGAGCGAGCTCTATCATCCTGATGACCACGTC
CTCTGA

Translation (351 aa):
MPGAAAKGSELSERIEGFVETLKRGGGQRSSEDMARETLGLLRRLITDHHWNNAGDLMDLIRREGRRMTA
AQPSETTVGNMVRRVLKIIREEYGRLHGRSDESDQQESLHKLLTSGGLSEDFSFHFAPLKANIIEAINEL
LVELEGTMENIAAQALEHIHSNEVIMTIGYSRTVEAFLKEAARKRKFHVIVAECAPFCQGHEMAVNLSKE
GIETTVMTDAAIFAVMSRVNKVIIGTKTILANGSLRAVAGTHTLALAAKHHSTPLIVCAPMFKLSPQFPS
EEDSFHKFVAPEEVLPFTEGDILEKVSVHCPVFDYVPPDLITLFISNIGGNAPSYIYRLMSELYHPDDHV
L


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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