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Report for CCDS19655.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19655.1 Public Mus musculus 5 Camkk2 23 108 98 CCDS HistoryNCBI Gene:207565Re-query CCDS DB by CCDS ID:19655.1Re-query CCDS DB by GeneID:207565See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19655.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000200109.4 ENSMUSP00000143732.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000200109.4Link to Ensembl Protein Viewer:ENSMUSP00000143732.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000200109Re-query CCDS DB by Protein ID:ENSMUSP00000143732
Original member Current member NCBI NM_145358.2 NP_663333.1 Accepted alive Link to Nucleotide Sequence:NM_145358.2Link to Protein Sequence:NP_663333.1Re-query CCDS DB by Nucleotide ID:NM_145358Re-query CCDS DB by Protein ID:NP_663333Link to BLAST:NP_663333.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663333.1 541 Q8C078-2 541 100% 0 0

Chromosomal Locations for CCDS 19655.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 122734173 122734245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 122737433 122737533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 122742100 122742228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 122743870 122743957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 122744058 122744131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 122745708 122745761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 122746250 122746449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 122747954 122748042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 122748178 122748199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 122750015 122750051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 122753699 122753832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 122756603 122756654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 122757560 122757613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 122758953 122759000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 122763774 122764244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1626 nt):
ATGTCATCATGTGTCTCTAGCCAGCCCACCAGCGACCGGGTGGCCCCCCAGGATGAGCTGGGAAGTGGGG
GTGGCAGCCGGGAAGGCCAGAAGCCCTGTGAGGCACTGCGGGGACTCTCATCCTTAAGTATCCACTTGGG
CATGGAATCCTTCATCGTGGTCACCGAGTGTGAGCCAGGCCGGGGTGTGGACCTCAACCTGGCCAGAGAC
CAGCCTCCGGAGGCCGATGGCCAGGAACTCCCCCTCGAAGCCTCGGACCCTGAGTCCCGGTCCCCGCTTT
CTGGTCGCAAGATGTCCCTGCAGGAGCCGTCCCAGGGCGGGCCGGCATCCAGCAGCAACAGCCTGGACAT
GAATGGACGCTGCATCTGCCCATCCCTGTCCTACTCACCAGCCAGCTCCCCACAGTCCTCTCCCCGGATG
CCCCGGCGGCCCACAGTAGAGTCACACCACGTCTCCATTACCGGTTTGCAGGACTGCGTGCAGCTGAATC
AGTACACCCTGAAGGATGAAATTGGAAAGGGCTCCTATGGTGTTGTCAAGCTGGCCTACAATGAAAATGA
CAATACTTATTACGCAATGAAAGTGCTGTCCAAAAAGAAGCTGATCCGACAGGCTGGCTTCCCACGTCGC
CCCCCACCACGAGGAGCTCGCCCAGCCCCAGGGGGCTGCATCCAGCCCAGGGGCCCCATCGAGCAAGTGT
ACCAGGAGATTGCTATCCTCAAAAAGCTGGATCATCCCAACGTGGTGAAGCTGGTAGAGGTCCTGGATGA
CCCTAATGAGGACCATCTGTACATGGTGTTTGAGTTGGTGAACCAAGGGCCTGTAATGGAAGTGCCCACC
CTCAAGCCACTGTCCGAAGACCAGGCCCGCTTCTACTTCCAGGATCTGATCAAAGGCATAGAGTACTTGC
ATTACCAGAAGATCATCCATCGGGACATCAAACCTTCCAACCTCCTGGTGGGGGAAGACGGGCACATCAA
GATTGCCGACTTCGGTGTAAGCAACGAGTTCAAGGGCAGCGACGCCTTGCTGTCTAACACCGTGGGCACA
CCTGCCTTCATGGCACCCGAGTCGCTCTCAGAGACCCGCAAGATCTTCTCCGGAAAGGCGTTGGATGTTT
GGGCCATGGGTGTGACGCTGTACTGCTTTGTCTTTGGCCAGTGCCCTTTCATGGATGAACGAATCATGTG
TTTGCACAGTAAGATCAAGAGTCAGGCCCTGGAGTTTCCCGACCAGCCCGATATAGCCGAAGACTTGAAA
GATCTGATCACTCGGATGTTGGACAAAAATCCAGAGTCCAGGATTGTGGTGCCTGAAATCAAGCTGCACC
CTTGGGTTACGAGGCACGGGGCCGAGCCATTGCCGTCGGAGGACGAGAACTGCACACTGGTCGAGGTGAC
CGAAGAGGAGGTCGAGAATTCAGTCAAACACATTCCCAGCCTGGCAACTGTGATCCTGGTAAAGACCATG
ATTCGAAAGCGCTCATTCGGGAACCCGTTCGAAGGTAGCCGCCGGGAGGAACGTTCCCTGTCAGCGCCTG
GAAACCTGCTCACGAAGCAAGGCAGCGAAGACAGCCCCCGGGGCCCAGAGCCGGCCCCTGTGGGGGAGGA
GGAAGTGCTCTTGTGA

Translation (541 aa):
MSSCVSSQPTSDRVAPQDELGSGGGSREGQKPCEALRGLSSLSIHLGMESFIVVTECEPGRGVDLNLARD
QPPEADGQELPLEASDPESRSPLSGRKMSLQEPSQGGPASSSNSLDMNGRCICPSLSYSPASSPQSSPRM
PRRPTVESHHVSITGLQDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRR
PPPRGARPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT
LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGT
PAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLK
DLITRMLDKNPESRIVVPEIKLHPWVTRHGAEPLPSEDENCTLVEVTEEEVENSVKHIPSLATVILVKTM
IRKRSFGNPFEGSRREERSLSAPGNLLTKQGSEDSPRGPEPAPVGEEEVLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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