CCDS Report for Consensus CDS

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Report for CCDS36251.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
36251.1	Public	Mus musculus	11	Unc45b	23	108	98

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 36251.1

Source	Nucleotide ID	Protein ID	Status in CCDS	Seq. Status
EBI	ENSMUST00000018989.13	ENSMUSP00000018989.7	Accepted	alive
NCBI	NM_178680.4	NP_848795.3	Updated	not alive
NCBI	NM_178680.5	NP_848795.3	Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_848795.3	929	Q8CGY6-2	929	100%	0	0

Chromosomal Locations for CCDS 36251.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)

Genome Browser links:

Chromosome	Start	Stop
11	82911680	82911847
11	82912395	82912431
11	82913204	82913379
11	82915050	82915139
11	82917032	82917199
11	82917729	82917897
11	82919724	82919894
11	82922748	82922919
11	82925887	82926187
11	82928655	82928749
11	82928932	82929073
11	82929421	82929561
11	82933832	82933959
11	82934745	82934811
11	82936374	82936487
11	82936824	82936939
11	82937736	82937853
11	82940189	82940344
11	82942491	82942751

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2790 nt):
ATGGCAGAGGCTGAAGCGGCACAGCTGAAGGAGGAGGGGAACCGGCATTTTCAGCTCCAGGATTACAAGG CGGCCACCAAGAGCTACAGCCAGGCCCTGAAGCTGACCAAGGACAAGGCTCTGCTAGCTACACTCTACCG GAATCGGGCAGCCTGCGGCCTGAAAATGGAGAGCTACGCCCAGGCAGCCTCGGATGCTTCCAGAGCCATT GACATCAACTCTGCTGACATCAAAGCATTGTATCGGCGATGCCAGGCACTGGAGCATCTTGGCAAGTTGG ACCAGGCATTCAAGGATGTGCAGCGCTGTGCTACCCTGGAGCCAAGGAACCAGAACTTCCAGGAGACACT GCGGAGGCTCAACACCAGCATCCAAGAGCAGCTCCGTGTGCAGTTTTCTACAGACTCCAGGGTACAGACG ATGTTTGAAATTCTTCTGAACGAAAACAGCGAGGCTGATAAGCGAGAGAAGGCTGCCAACAACCTCATTG TCCTGGGCCGTGAAGAAGCGGGTGCTGAGAGGATCTTCCAGAGCAATGGAGTGGCTCTGCTGCTGCAGCT TATGAACACCCAGCGGCCTGAGCTGCTGCTAGCGGCTGTGCGGACGCTGTCTGGCATGTGCAGTGGCCAC AGAGCTAGGGCCACCGCCATCCTGCACGCAGTCCGCATAGACAGAATCTGCAGCCTCATGGCCCTGGAGA ATGAAGAGATGTCCCTGGCTGTCTGCAACCTGCTCCAGGCCATCATTGACTCCCTGTCTGGAGAGGACAA GAGAGAGCATCGTGGGAAGGAGGAGGCCTTGGTTCTAGATACCAAGAAGGACCTGAAGCAGATCACCAGC CACCTGCTGGACATGCTGGTCAGTAAGAAAGTGTCTGGGCAGGGCAGAGACCAGGCACTGAACCTGCTTA ATAAGAATGTCCCCAGGAAGGACCTGTCCATTCATGACAACTCACGCACCATCTATGTTGTAGATAACGG TCTGAGGAAGATCCTGAAGGTGGTGGGGCAGGTTCCAGACCTGCCCTCCTGCCTACCCCTGACGGACAAC ACCCGCATGCTGGCCTCCATCCTCATCAACAAGCTCTATGATGACCTGCGCTGTGACCCAGAGCGCGACC ACTTCCGCAAGATCTGTGAGGAGTATATCACGAGCAAATTTGACCCCCAGGACATGGACAAGAATGTAAA TGCCATCCAGACGGTGTCCGGCATCTTGCAGGGGCCCTTTGACCTGGGCAATCAGCTGCTGGGCATGAAA GGTGTGATGGAGATGATGGTGGCTCTGTGTGGCTCGGAGCGCGAGGCAGACCAGCTGGTGGCTGTGGAGG CTCTCATCCACGCCTCCACGAAGCTCAGCCGGGCCACCTTCATCATCACCAACGGAGTGACACTTCTTAA GCAGATCTACAAGACCACAAAGAATGAGAAGATCAAGATCCGCACGCTGGTGGGGCTCTGTAAACTTGGC TCAGCTGGAGGCTCCGACTATGGTCTCAGACAGTTTGCTGAAGGGTCAACAGAGAAGCTAGCCAAGCAGT GTCGAAAGTGGCTGTGTAACACCGCCATAGACACCCGGACGCGGCGCTGGGCAGTGGAGGGCCTGGCCTA CCTCACGCTGGACGCTGACGTGAAGGACGACTTTGTCCAGGACATCCCTGCTCTGCAGGCCATGTTTGAG TTGGCCAAGACCAGTGACAAGACCATCCTCTACTCAGTGGCCAACACCCTGGTAAACTGCACCAACAGCT ATGATGTCAAGGAGGTCGTCCCTGAGCTGGTGCAGCTGGCCAAGTTCTCCAAGCAACATGTGCCAGAGGA GCACCCCAAGGACAAGAAGGACTTCGTTGACTTGCGGGTGAAACGTCTTCTGAAGGCAGGTGTCATATCT GCACTGGCCTGCATGGTGAAGGCAGACAGTGCCATCCTCACAGACCAGACCAAGGAGCTGCTGGCCAGGG TATTCCTGGCACTCTGTGACAATCCAAAGGACCGGGGCACCATTGTAGCTCAAGGTGGTGGCAAGGCCCT GATCCCCCTGGCTTTGGAGGGCACAGATGTGGGCAAGGTGAAGGCAGCCCATGGGCTAGCCAAGATTGCT GCTGTCTCCAACCCGGACATTGCCTTCCCTGGGGAGAGGGTATATGAGGTGGTGCGGCCCCTCGTGAGTC TCCTGGACACACAGAGGGATGGGCTTCAGAACTATGAGGCTCTGCTGGGACTGACTAACCTGTCTGGGCG CAGTGACAAACTCAGGCAGAAGATCTTCAAGGAGAAGGCCTTGCCAGACATTGAAAACTACATGTTTGAG AACCATGACCAGCTACGGCAGGCAGCCACCGAATGCATGTGTAACATGGTGCTCAATAAGGAGGTTCAGG AGAGGTTCCTGGCCGATGGGAATGATCGTCTGAAGCTGGTGGTGCTGCTCTGTGGGGAGGATGACCACAA ACTGCAGAACGCAGCAGCTGGAGCTCTAGCCATGCTGACCGCGGCACATAAGAAACTGTGCCTCAAGATG ACGGAGGTGACAACCCAGTGGCTGGAGATCCTACAGCGGCTTTGCCTGCATGACCAGTTGTCCGTGCAGC ACCGGGGCCTGGTCATTGCCCACAACCTGCTATCAGCGGATGCTGAGCTGGCGAGGAAGCTGGTGGAGAG CGAGCTGCTGGAGATCCTGACTGTGGTGGGAAAGCAGGAGCCAGATGAGAAGAGAGCGGCTGTGGTCCAG ACAGCCCGGGAGTGTCTTATCAAGTGCATGGATTATGGCTTCATCAAGCCGGTGTCATAG
Translation (929 aa):
MAEAEAAQLKEEGNRHFQLQDYKAATKSYSQALKLTKDKALLATLYRNRAACGLKMESYAQAASDASRAI DINSADIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQETLRRLNTSIQEQLRVQFSTDSRVQT MFEILLNENSEADKREKAANNLIVLGREEAGAERIFQSNGVALLLQLMNTQRPELLLAAVRTLSGMCSGH RARATAILHAVRIDRICSLMALENEEMSLAVCNLLQAIIDSLSGEDKREHRGKEEALVLDTKKDLKQITS HLLDMLVSKKVSGQGRDQALNLLNKNVPRKDLSIHDNSRTIYVVDNGLRKILKVVGQVPDLPSCLPLTDN TRMLASILINKLYDDLRCDPERDHFRKICEEYITSKFDPQDMDKNVNAIQTVSGILQGPFDLGNQLLGMK GVMEMMVALCGSEREADQLVAVEALIHASTKLSRATFIITNGVTLLKQIYKTTKNEKIKIRTLVGLCKLG SAGGSDYGLRQFAEGSTEKLAKQCRKWLCNTAIDTRTRRWAVEGLAYLTLDADVKDDFVQDIPALQAMFE LAKTSDKTILYSVANTLVNCTNSYDVKEVVPELVQLAKFSKQHVPEEHPKDKKDFVDLRVKRLLKAGVIS ALACMVKADSAILTDQTKELLARVFLALCDNPKDRGTIVAQGGGKALIPLALEGTDVGKVKAAHGLAKIA AVSNPDIAFPGERVYEVVRPLVSLLDTQRDGLQNYEALLGLTNLSGRSDKLRQKIFKEKALPDIENYMFE NHDQLRQAATECMCNMVLNKEVQERFLADGNDRLKLVVLLCGEDDHKLQNAAAGALAMLTAAHKKLCLKM TEVTTQWLEILQRLCLHDQLSVQHRGLVIAHNLLSADAELARKLVESELLEILTVVGKQEPDEKRAAVVQ TARECLIKCMDYGFIKPVS

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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