CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS36062.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
36062.1 |
Public |
Mus musculus |
10 |
Zfc3h1 |
23 |
108 |
98 |
|
Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 36062.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000036044.8 |
ENSMUSP00000044069.8 |
Accepted |
alive |
|
|
|
NCBI |
NM_001033261.2 |
NP_001028433.2 |
Accepted |
alive |
|
Chromosomal Locations for CCDS 36062.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (5979 nt): ATGGCGGCCGCCGCCGATCCTTCGACCCCGGCCTCTAGCGGCCTCTCGCCGAAGGAAGAAGGGGAGCTCG AAGACGGGGAGATCAGCGACGACGACAACAGCCGGAGCCGGAGCAGCAGCAGCAGCAGCAGCGGCGGCGG GCTGTTACCGTACCCGCGGCGGCGGCCTCCTCCCCCGGCCCGGGGCGGTGGATCCGGGGGAGGCGGCGGC GGCTCCTCGTCCTCCTCGTCGTCCTCCCAGCAGCAGCTGAGGAATTTCTCACGCTCACGGCACCCGGCCG AGCGGGGCCAGCTCAGGGGACCCAGCAGCTACCGACCCAAAGAACCGTTCCGGACTCACCCGCCCCCAGG GCGGATGCCGTCGGGGTCCCTGTCGGAAAGCAGCCCCCGGCCGTCCTTCTGGGAGCGGAGCCACATCGCC CTGGACCGTTTCCGCTTTCGAGGCAGCAGGCCTTACCGGGGTGGGAGTCGCTGGAGTCGGGGGCGAGGAG TGGGGGAGCGAGGAGGCAAGCCGGGGTGCAGACCTCCTGGAGGAGGAGGATCAGGAGGAGCGGGATCCGG ATTCGGCAGCAGCCAGAGCTGGCGAGAACCCTCTCCACCCCGCAAGAGCTCCAAAAGCTTTGGAAGATCT CCATCAAGAAAACAGAATCACTCATCCAAAAGCGAGAACTGTGCGGAAGAAACTTTTGAAGATTTGCTTT TAAAGTATAAGCAAATACAACTGGAACTAGAGTGCATCAATAAGGATGAAAAACTGGCTCTGAGTAGCAA AGAAGAGACTGCACAGGAAGATCCGAAAACATTGCATTTGGAGGACCAAACAAGCACCGATAATGCTAGT ATTACAAAAGACCCAAGTAAGGAAGTGGCTCCTGAGGAGAAGACACAGGTCAAAACTTTTCAGGCATTTG AATTAAAACCACTCAGGCAAAAACTGACTTTACCAGGGGATAAGAACCGGGTCAAAAGAGGGAAGGATGG AACAAGGCAGCTTTCCTTGAAATCCAGCACTACGGATGCTAGCCAAGGATTAGAAGATAAAGAACAAAAT TTAACAAGAAGACTCAGTGCCTCAGATATTGTATCTGAAAAGAAACTTGGTGAAGAAGAAGAGGAACTGT CTGAGCTGCAGCTTCGCCTGTTGGCTCTTCAGTCGGCTAGTAAGAAATGGCAGCAGAAAGAGCAGCAGGT GATGAAGGAGAGCAAAGAAAAACTGACCAAGACCAAAACTGCACAGCAAAAGGCCAAAACCAGCACAAAA GCACACTCGGCCAAGAAAGTGAGCGCCACAGCTAAACAAGCACTGCGGAAGCAGCAGACAAAGGCGTGGA AGAAGCTCCAGCAGCAGAAAGAGCAGGAGAGACAGAAAGAGGAGGATCAGCGGAAACACGCTGAGGAAGA AGAGAGGAGGAAAAGAGAAGAAGAAATCAGAAAGATCCGAGACCTTTCCAACCAGGAAGAGCAGTACAAT CGGTTCATGAAGTTGGTTGGTGGGAAGAGGCGAGCAAGAAGTAAATCTTCAGATCCTGACCTGAGGCGGT CCTTAGAAAAGCAGTCTGACAGTGCAGGAGGCATATATCAGTATGATAACTACGAAGAAGTTGCTATGGA TACAGATAGTGAAACCAGTTCTCCAGCGCCTTCACCCGTACAGCCACCGTTTTTTCCTGAGTGTTCACTG GGGTATTTTTCTTCAGCACCGTCTGTTTCTTTGCCTCCACCAGCTCAGGTTTCATCTGTGCCATCTTTGA ACCAACCTTATGGGGAAGGCCTGTGCGTTTCTCTCGACCCTCTACCTCCTCTTCCACCTTTGCCACCTCT ACCACCTGAAGATCCAGAACAGCCTCCAAAGCCACCATTTGCAGATGAAGAGGAGGAGGAAGAAATGCTC CTTCGAGAAGAACTGCTTAAATCTCTAGCAAGTAAAAGAGCTTTTAAGCCAGAGGAAACATCCAGTAATA GCGACCCACCTTCACCTCCAGTTTTGAACAATTCCCAGCCTTTGTCAAGAAGCAACCTATCAATAGTCAG TATTAATACAGTATCTCAGCCTAGGATACAGAATCCAAAGTTCCACAGAGGACCTCGTCTTCCACGAACT GTGATCTCGCTTCCAAAACACAAATCAGTGGTTGTAACCCTGAATGACTCAGATGACAGTGAGTCTGACG GAGAAGCTTCCAAGTCAACCAACAGTGTGTTTGGTGGATTAGAGTCCATGATCAAAGAAGCAAGGCGGAC TGCAGAGCAAGCATCAAAACCCAAAGTACCTCCAAAGTCTGAGAAAGAAAACGACCCTCTGCGGACCCCT GAAGCCTTGCCTGAAGAAAAGAAGATGGAATACAGATTGTTAAAAGAAGAGATTGCCAATCGTGAGAAGC AACGTTTGATTAAATCAGATCAGCTGAAGACAAGTTCGTCGTCTCCAGCAAACTCAGATGTGGAAATGGA TGGGATTGGTAGAATAGCAATGGTTACTAAGCAAGTTGCAGATGCAGAAGCAAAGCTTAAAAAACACAAG ATTCTCTTGATTAAAGATGAATCAGTTTTAAAAAATCTAGTACTGCAAGAAGCCAAGAAGAAAGAGTCTG TTCGAAATGCTGAAGCAAAAATTACAAAACTTACAGAACAGCTGCAGGCAGCAGAGAAAATCCTCAGTGC TAACAGGATGTTTCTGAAGAAGCTCCAGGAACAAATTCACAGAGTTCAACAGCGTGTTACCATTAAGAAA GCGTTGACTCTGAAGTATGGAGAAGAGCTTGCTCGGGCAAAGGCAGTGGCTAGCAAAGAACTAGGGAAAC GCAAACTGGAGCAGGACCGTCTTGGACCAAACAAAATGATGAGACTGGATAATTCTCCAATATCAAGTCC AAGGAAGCATTCAGCAGAATTAATTGCTATGGAAAAAAGACGATTACAAAAGCTAGAATATGAATATGCC TTGAAAATTCAAAAGTTAAAAGAAGCCCGAGCCCTCAAAGCAAAGGAACAACAAAACCTCGTTCCCGTAG TGGAAGAGGAACCTGAGTTTTCTGTACCTCAACCCTCGCTTCATGATCTGACACAGGATAAATTAACCTT GGACACAGAAGAAAATGATGTTGATGATGAAGTTTTGTCAGGTGCAAGCAGAGAACGAAGAAGATCCTTC CTAGAGTCCAATTCTTTCACTAAACCCAACCTTAAGCACACTGACACACCTAACAAAGAGTGTATAAACA AACTTAGTAAGAGTACTGTAGAAAAACCAGAACTTTTTCTAGGGTTAAAAATAGGTGAACTACAAAAATT ATATTCAAGAGCTGACAGTTTAAAACAGTTGATTTTAAAAACGACCACAGGCACTACAGAAAAAGTTCTG CATGGCCAGGAGATTTCTGTGGATGTGGATTTTGTTACAGCACAGAGTAAAACAACAGAAGTGAAGCCAT GTCCATTTAGACCTTACCAGAGCCCTCTTCTTGTCTTTAAATCCTACAGATTTAGTCCTTACTACCGAAC CAAGGAAAAGCTCCCTCTAAGCTCAGTATCTTACAGTAACATGGTTGAGCCGGATCAGTGTTTCTGCCGC TTTGACTTAACAGGAACATGTAATGATGATGACTGTCAGTGGCAGCATGTACAAGACTATACACTTAGCA GGAAACGGTTGTTCCAGGACATTCTCTCATACAATCTGTCTTTGATTGGCTGTTCAGAGATGAGCACTGA TGAGGAAATTGCTTCTGCAGCAGAAAAATATGTTGAAAAACTTTTTGGAGTAAACAAAGACCGGATGTCA ATGGACCAGATGGCTGTTCTCCTTGTCAGCAATGTTAATGAAAGTAAAGGCCATACACCTCCATTTACAA CTTACAAAGATAAAAGAAAATGGAAGCCAAAGTTTTGTAGAAAGCCTGTATCAGAGAATAGCTGCAGTAG TGATGATGAGCAGTCTACAGGACCAATTAAGTACGCCTTCCGACCAGAGAAGCAAATAAATGTCCCAGCT CTGGACACCGTTGTCACTCCAGACGATGTTAGATATTTTACCAGTGAAACTGATGACATTGCTAACTTAG AAGCAAGTGTACTGGAAAATCCATCCCATGTACAACTTTGGCTCAAGCTTGCGTACAAGTACTTGAATCA AAATGAGGGGCTGTGTTCAGAATCTTTGGACTCTGCTTTAAATGTACTGGCTCGAGCTCTGGAAAACAAT AAAGACAATCCAGAAATTTGGTGCCATTACCTCAGATTGTTCTCAAAAAGAGGGACCAAGGAGGAGGTGC AGGAAATGTGTGAAACAGCTGTTGAGTATGCTCCTGACTATCAAAGCTTTTGGACTTTTTTGCACCTAGA AAGCACCTTTGAAGAAAAGGATTATGTGTGTGAGAGGATGGTGGAGTTTCTGATGGGAGCGGCCAAGCGG GAAATATCAGATATTCTGTCCTTTCAGCTTTTAGAGGCTCTTTTGTTTAGAGTTCAGCTACATATATTTA CTGGGAGATGCCAAAGTGCACTTGCAGTTTTACAGAATGCATTAAAATTGGCTAATGATGCAATAGTAGC TGAGTACCTTAAGACAGATGATCGGTGTCTGGCATGGCTGGCCTACATACATCTTATTGAATTCAATAGT CTCCCTTCAAAACTTTATGATCCATCTAATGCTAATCCTTCAAGAATTGTTAACACAGAACCGTTTGTAA TGCCATGGCAAGCAGCTCAAGATGTCAAGACCAATCCTGACTTATTGTTAGCAGTGTTTGAAGATGCGGT GAAAGCTTGTACAGATGAGACCCTTACCAGTGGAGAAAGAATAGAGGTCTGCCTTCCACTTTACACAAAC ATGATCGCTCTACACCAACTCCTAGAGAGGTATGAGGAGGCAGTGGAGCTTTGCACAAGCTTGTTGGAGT CGTGTCCCACAAACTGCCAGTTATTGGAAACCCTTGCAGCTTTGTATTTGAAAACAGATCGATATGACAA AGCCCGAAGGGTTTGGCTTACTGCATTTGAAAATAACCCTCAGAATGCGGAAATTTTTTATCATCTCTGC AAATTTTTCATCTTGCAGGACGGAGGTGATAAGCTTCTTCCAGTTCTGAGGCAGTTCGTTGGATCCTTCT TTAAACCTGGCTTTGAGAAGTACAGTAATGTGGATTTATTTCGGTATCTCTTAAATATTCCAGGACCACT CGACATTCCAGCGTGCTTATGCAAAGGGAATTTCGATGATGATGCATTTAACAACCAAGTCCCTTATTTA TGGCTGATTTACTGCCTTTGCCATCCTCTACAGTCCAGTATTAAAGAGACAGTGGAAGCGTATGAGGCGG CGTTAGGGGTGGCCATGAGGTCTGATATTGTGCAGAAGATTTGGATGGATTATCTTGTCTTTGCCAATAA TAGAGCTGCTGGATCCAGAAACAAAGTCCAAGAATTCAAACTTTTTACTGACCTAGTAAATAGATGTTTG GTTACGGTGCCTGCCCGATACCCCATCCCTTTTAGCAGTGCTGATTACTGGTCCAACTATGAATTCCATA ACCGGGTCATTTTCTTTTATTTGAGCTGTGTTCCAAAGACTCAGCACTCTAAAACCCTGGAGCGGTTTTG CTCTGCTATGCCAGCAAATTCCCGACTTGCACTGAGGCTACTTCAACATGAATGGGAAGAAAGCAATGTT CAGATTCTGAAACTCCAAGCCAAGATGTTTACATATAATATCCCAACATGCCTGGCCACCTGGAAAATAG CCATTGCTGCTGAGATTGCTCTAAAGGGACAAAGAGAGGTCCACCGTTTATATCAGAGAGCCTTACAGAA GTTACCTCTTTGTGCATCACTATGGAAAGATCAACTCTTGTTTGAAGCATCAGAAGGAGGTAAAACTGAT AACCTGAGAAAACTAGTTTCCAAGTGCCAAGAGATTGGAGTCAGCCTAAATGAGCTCTTAAATTTAAACA GTAACAAAACAGAAAGCAAGAATCTCTGA
Translation (1992 aa): MAAAADPSTPASSGLSPKEEGELEDGEISDDDNSRSRSSSSSSSGGGLLPYPRRRPPPPARGGGSGGGGG GSSSSSSSSQQQLRNFSRSRHPAERGQLRGPSSYRPKEPFRTHPPPGRMPSGSLSESSPRPSFWERSHIA LDRFRFRGSRPYRGGSRWSRGRGVGERGGKPGCRPPGGGGSGGAGSGFGSSQSWREPSPPRKSSKSFGRS PSRKQNHSSKSENCAEETFEDLLLKYKQIQLELECINKDEKLALSSKEETAQEDPKTLHLEDQTSTDNAS ITKDPSKEVAPEEKTQVKTFQAFELKPLRQKLTLPGDKNRVKRGKDGTRQLSLKSSTTDASQGLEDKEQN LTRRLSASDIVSEKKLGEEEEELSELQLRLLALQSASKKWQQKEQQVMKESKEKLTKTKTAQQKAKTSTK AHSAKKVSATAKQALRKQQTKAWKKLQQQKEQERQKEEDQRKHAEEEERRKREEEIRKIRDLSNQEEQYN RFMKLVGGKRRARSKSSDPDLRRSLEKQSDSAGGIYQYDNYEEVAMDTDSETSSPAPSPVQPPFFPECSL GYFSSAPSVSLPPPAQVSSVPSLNQPYGEGLCVSLDPLPPLPPLPPLPPEDPEQPPKPPFADEEEEEEML LREELLKSLASKRAFKPEETSSNSDPPSPPVLNNSQPLSRSNLSIVSINTVSQPRIQNPKFHRGPRLPRT VISLPKHKSVVVTLNDSDDSESDGEASKSTNSVFGGLESMIKEARRTAEQASKPKVPPKSEKENDPLRTP EALPEEKKMEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDVEMDGIGRIAMVTKQVADAEAKLKKHK ILLIKDESVLKNLVLQEAKKKESVRNAEAKITKLTEQLQAAEKILSANRMFLKKLQEQIHRVQQRVTIKK ALTLKYGEELARAKAVASKELGKRKLEQDRLGPNKMMRLDNSPISSPRKHSAELIAMEKRRLQKLEYEYA LKIQKLKEARALKAKEQQNLVPVVEEEPEFSVPQPSLHDLTQDKLTLDTEENDVDDEVLSGASRERRRSF LESNSFTKPNLKHTDTPNKECINKLSKSTVEKPELFLGLKIGELQKLYSRADSLKQLILKTTTGTTEKVL HGQEISVDVDFVTAQSKTTEVKPCPFRPYQSPLLVFKSYRFSPYYRTKEKLPLSSVSYSNMVEPDQCFCR FDLTGTCNDDDCQWQHVQDYTLSRKRLFQDILSYNLSLIGCSEMSTDEEIASAAEKYVEKLFGVNKDRMS MDQMAVLLVSNVNESKGHTPPFTTYKDKRKWKPKFCRKPVSENSCSSDDEQSTGPIKYAFRPEKQINVPA LDTVVTPDDVRYFTSETDDIANLEASVLENPSHVQLWLKLAYKYLNQNEGLCSESLDSALNVLARALENN KDNPEIWCHYLRLFSKRGTKEEVQEMCETAVEYAPDYQSFWTFLHLESTFEEKDYVCERMVEFLMGAAKR EISDILSFQLLEALLFRVQLHIFTGRCQSALAVLQNALKLANDAIVAEYLKTDDRCLAWLAYIHLIEFNS LPSKLYDPSNANPSRIVNTEPFVMPWQAAQDVKTNPDLLLAVFEDAVKACTDETLTSGERIEVCLPLYTN MIALHQLLERYEEAVELCTSLLESCPTNCQLLETLAALYLKTDRYDKARRVWLTAFENNPQNAEIFYHLC KFFILQDGGDKLLPVLRQFVGSFFKPGFEKYSNVDLFRYLLNIPGPLDIPACLCKGNFDDDAFNNQVPYL WLIYCLCHPLQSSIKETVEAYEAALGVAMRSDIVQKIWMDYLVFANNRAAGSRNKVQEFKLFTDLVNRCL VTVPARYPIPFSSADYWSNYEFHNRVIFFYLSCVPKTQHSKTLERFCSAMPANSRLALRLLQHEWEESNV QILKLQAKMFTYNIPTCLATWKIAIAAEIALKGQREVHRLYQRALQKLPLCASLWKDQLLFEASEGGKTD NLRKLVSKCQEIGVSLNELLNLNSNKTESKNL
|