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Report for CCDS26838.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26838.1 Public Mus musculus 14 Ube2e2 23 108 98 CCDS HistoryNCBI Gene:218793Re-query CCDS DB by CCDS ID:26838.1Re-query CCDS DB by GeneID:218793See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26838.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000076133.9 ENSMUSP00000075495.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000076133.9Link to Ensembl Protein Viewer:ENSMUSP00000075495.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000076133Re-query CCDS DB by Protein ID:ENSMUSP00000075495
Original member Current member EBI ENSMUST00000150727.7 ENSMUSP00000115738.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000150727.7Link to Ensembl Protein Viewer:ENSMUSP00000115738.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000150727Re-query CCDS DB by Protein ID:ENSMUSP00000115738
Original member Current member NCBI NM_001360327.1 NP_001347256.1 Accepted alive Link to Nucleotide Sequence:NM_001360327.1Link to Protein Sequence:NP_001347256.1Re-query CCDS DB by Nucleotide ID:NM_001360327Re-query CCDS DB by Protein ID:NP_001347256Link to BLAST:NP_001347256.1
Original member Current member NCBI NM_144839.2 NP_659088.1 Accepted alive Link to Nucleotide Sequence:NM_144839.2Link to Protein Sequence:NP_659088.1Re-query CCDS DB by Nucleotide ID:NM_144839Re-query CCDS DB by Protein ID:NP_659088Link to BLAST:NP_659088.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001347256.1 201 Q91W82 201 100% 0 0
NP_659088.1 201 Q91W82 201 100% 0 0

Chromosomal Locations for CCDS 26838.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 18574294 18574391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 18586851 18586998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 18630299 18630431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 18871494 18871544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 18888266 18888441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (606 nt):
ATGTCCACTGAGGCGCAGAGAGTTGATGACAGTCCAAGCACTAGTGGAGGAAGTTCTGATGGAGATCAGC
GGGAGAGCGTTCAGCAGGAACCTGATCGAGAACAAGTTCAGCCTAAGAAAAAGGAGGGGAAGATATCCAG
CAAGACAGCCGCGAAACTGTCAACCAGTGCCAAAAGAATTCAGAAGGAGCTTGCAGAAATCACGCTGGAT
CCCCCTCCCAACTGTAGTGCTGGACCCAAAGGAGACAACATTTATGAATGGAGGTCAACTATATTGGGAC
CCCCAGGATCTGTCTATGAAGGAGGGGTATTCTTTCTTGACATTACCTTTTCACCAGATTATCCGTTTAA
ACCCCCTAAGGTCACCTTCCGAACGAGAATCTATCACTGTAATATCAACAGCCAGGGTGTAATCTGTCTG
GACATCCTCAAGGACAACTGGAGTCCGGCCCTGACCATCTCTAAAGTCCTCCTGTCCATCTGCTCACTAC
TTACAGACTGCAACCCTGCCGACCCTCTGGTGGGCAGTATTGCCACACAGTACATGACCAACAGAGCGGA
GCATGACCGGATGGCCAGACAGTGGACCAAGCGGTACGCCACCTAG

Translation (201 aa):
MSTEAQRVDDSPSTSGGSSDGDQRESVQQEPDREQVQPKKKEGKISSKTAAKLSTSAKRIQKELAEITLD
PPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICL
DILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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