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Report for CCDS14546.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14546.1 Public Homo sapiens X NXT2 24 110 108 CCDS HistoryNCBI Gene:55916Re-query CCDS DB by CCDS ID:14546.1Re-query CCDS DB by GeneID:55916See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14546.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000218004.5 ENSP00000218004.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000218004.5Link to Ensembl Protein Viewer:ENSP00000218004.1Re-query CCDS DB by Nucleotide ID:ENST00000218004Re-query CCDS DB by Protein ID:ENSP00000218004
Original member Current member NCBI NM_018698.5 NP_061168.2 Accepted alive Link to Nucleotide Sequence:NM_018698.5Link to Protein Sequence:NP_061168.2Re-query CCDS DB by Nucleotide ID:NM_018698Re-query CCDS DB by Protein ID:NP_061168Link to BLAST:NP_061168.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061168.2 197 Q9NPJ8-3 197 100% 0 0

Chromosomal Locations for CCDS 14546.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 109535883 109535977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109536937 109537021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109538045 109538131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109541475 109541619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 109542507 109542688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (594 nt):
ATGAGAAAATACAGAAGCCACTGGTCTCAGGGAGACAGAGAAGGATACCAAAGAAGAAGTAACTATTATG
AGGGGCCACACACCAGCCACTCAAGCCCTGCGGACCGGACACGTGAGGAGGTAGTGACGCCGACACTGCC
AGAACACACTGCTACAAGGTCCCAGATGGCCACGTCTCTGGATTTTAAAACTTATGTAGATCAGGCATGT
AGAGCTGCTGAGGAGTTTGTCAATATTTACTATGAGACAATGGATAAAAGAAGACGGGCACTAACCAGGC
TGTATCTGGACAAGGCCACCTTAATATGGAATGGAAATGCTGTTTCAGGGCTGGATGCCCTAAATAATTT
TTTTGACACATTGCCTTCTAGTGAGTTCCAGGTCAATATGTTAGATTGCCAACCAGTTCATGAGCAAGCA
ACTCAGTCCCAAACTACAGTTCTTGTTGTGACCAGTGGAACTGTGAAGTTTGATGGAAACAAACAACATT
TCTTCAACCAGAACTTCCTGCTGACTGCTCAGTCCACTCCCAACAATACTGTGTGGAAGATTGCAAGTGA
TTGCTTCCGTTTTCAAGATTGGTCTAGTAGTTAA

Translation (197 aa):
MRKYRSHWSQGDREGYQRRSNYYEGPHTSHSSPADRTREEVVTPTLPEHTATRSQMATSLDFKTYVDQAC
RAAEEFVNIYYETMDKRRRALTRLYLDKATLIWNGNAVSGLDALNNFFDTLPSSEFQVNMLDCQPVHEQA
TQSQTTVLVVTSGTVKFDGNKQHFFNQNFLLTAQSTPNNTVWKIASDCFRFQDWSSS


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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