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Report for CCDS2350.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2350.1 Public Homo sapiens 2 CDK15 24 110 108 CCDS HistoryNCBI Gene:65061Re-query CCDS DB by CCDS ID:2350.1Re-query CCDS DB by GeneID:65061See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2350.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000260967.6 ENSP00000260967.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000260967.6Link to Ensembl Protein Viewer:ENSP00000260967.2Re-query CCDS DB by Nucleotide ID:ENST00000260967Re-query CCDS DB by Protein ID:ENSP00000260967
Original member Current member EBI ENST00000410091.7 ENSP00000386901.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000410091.7Link to Ensembl Protein Viewer:ENSP00000386901.3Re-query CCDS DB by Nucleotide ID:ENST00000410091Re-query CCDS DB by Protein ID:ENSP00000386901
Original member Current member NCBI NM_139158.2 NP_631897.1 Accepted alive Link to Nucleotide Sequence:NM_139158.2Link to Protein Sequence:NP_631897.1Re-query CCDS DB by Nucleotide ID:NM_139158Re-query CCDS DB by Protein ID:NP_631897Link to BLAST:NP_631897.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_631897.1 384 Q96Q40-4 384 100% 0 0

Chromosomal Locations for CCDS 2350.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 201807524 201807643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201807858 201807952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201812483 201812562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201822809 201822903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201823665 201823727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201833848 201833971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201835643 201835763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201847381 201847474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201854874 201854937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201872278 201872326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201880028 201880167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201890785 201890894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1155 nt):
ATGACTTCATTTCACCCCAGGGGACTTCAAGCTGCCCGTGCCCAGAAGTTCAAGAGTAAAAGGCCACGGA
GTAACAGTGATTGTTTTCAGGAAGAGGATCTGAGGCAGGGTTTTCAGTGGAGGAAGAGCCTCCCTTTTGG
GGCAGCCTCATCTTACTTGAACTTGGAGAAGCTGGGTGAAGGCTCTTATGCGACAGTTTACAAGGGGATT
AGCAGAATAAATGGACAACTAGTGGCTTTAAAAGTCATCAGCATGAATGCAGAGGAAGGAGTCCCATTTA
CAGCTATCCGAGAAGCTTCTCTCCTGAAGGGTTTGAAACATGCCAATATTGTGCTCCTGCATGACATAAT
CCACACCAAAGAGACACTGACATTCGTTTTTGAATACATGCACACAGACCTGGCCCAGTATATGTCTCAG
CATCCAGGAGGGCTTCATCCTCATAATGTCAGACTTTTCATGTTTCAACTTTTGCGGGGCCTGGCGTACA
TCCACCACCAACACGTTCTTCACAGGGACCTGAAACCTCAGAACTTACTCATCAGTCACCTGGGAGAGCT
CAAACTGGCTGATTTTGGTCTTGCCCGGGCCAAGTCCATTCCCAGCCAGACATACTCTTCAGAAGTCGTG
ACCCTCTGGTACCGGCCCCCTGATGCTTTGCTGGGAGCCACTGAATATTCCTCTGAGCTGGACATATGGG
GTGCAGGCTGCATCTTTATTGAAATGTTCCAGGGTCAACCTTTGTTTCCTGGGGTTTCCAACATCCTTGA
ACAGCTGGAGAAAATCTGGGAGGTGCTGGGAGTCCCTACAGAGGATACTTGGCCGGGAGTCTCCAAGCTA
CCTAACTACAATCCAGAATGGTTCCCACTGCCTACGCCTCGAAGCCTTCATGTTGTCTGGAACAGGCTGG
GCAGGGTTCCTGAAGCTGAAGACCTGGCCTCCCAGATGCTAAAAGGCTTTCCCAGAGACCGCGTCTCCGC
CCAGGAAGCACTTGTTCATGATTATTTCAGCGCCCTGCCATCTCAGCTGTACCAGCTTCCTGATGAGGAG
TCTTTGTTTACAGTTTCAGGAGTGAGGCTAAAGCCAGAAATGTGTGACCTTTTGGCCTCCTACCAGAAAG
GTCACCACCCAGCCCAGTTTAGCAAATGCTGGTGA

Translation (384 aa):
MTSFHPRGLQAARAQKFKSKRPRSNSDCFQEEDLRQGFQWRKSLPFGAASSYLNLEKLGEGSYATVYKGI
SRINGQLVALKVISMNAEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMHTDLAQYMSQ
HPGGLHPHNVRLFMFQLLRGLAYIHHQHVLHRDLKPQNLLISHLGELKLADFGLARAKSIPSQTYSSEVV
TLWYRPPDALLGATEYSSELDIWGAGCIFIEMFQGQPLFPGVSNILEQLEKIWEVLGVPTEDTWPGVSKL
PNYNPEWFPLPTPRSLHVVWNRLGRVPEAEDLASQMLKGFPRDRVSAQEALVHDYFSALPSQLYQLPDEE
SLFTVSGVRLKPEMCDLLASYQKGHHPAQFSKCW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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