NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS20975.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20975.1 Public Mus musculus 7 Zfp526 23 108 98 CCDS HistoryNCBI Gene:210172Re-query CCDS DB by CCDS ID:20975.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20975.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000055604.5 ENSMUSP00000053567.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000055604.5Link to Ensembl Protein Viewer:ENSMUSP00000053567.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000055604Re-query CCDS DB by Protein ID:ENSMUSP00000053567
Original member Current member NCBI NM_175436.5 NP_780645.1 Accepted alive Link to Nucleotide Sequence:NM_175436.5Link to Protein Sequence:NP_780645.1Re-query CCDS DB by Nucleotide ID:NM_175436Re-query CCDS DB by Protein ID:NP_780645Link to BLAST:NP_780645.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_780645.1 675 Q8BI66-1 675 100% 0 0

Chromosomal Locations for CCDS 20975.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 25224318 25226345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2028 nt):
ATGGCAGAGATGGTGGCAGAGGCAGCTGAGATACCAACACAATCATCAGGAGCAGTGGAAATCTCAACGG
CTGTGTCAGGAGAGCTGGCAGAGATGGCGACAGCAGTGACTGAGATGACCTCTGGAGAGGCCCTTGCCTC
GTCCCTCTTCTTCCAGCACCACCAGTTCATGTGCTCGGAGTGTGGCAGCCTCTACAACACCCTGGAGGAA
GTCCTCTCCCACCAGGAACAACACCTGCTCACCATGTCAGAGGAGGAGACTCTGACCACCCAGGATGCAG
GCCTGGAGCCTGAGCTAGTGCCTAGCACTGGGGAAGGACCCTTCCAGTGTGGTGAATGCAGCCAGCTCAT
CCTCTCTCCCAGCGAGCTCCTTGCCCACCAGGATGCCCACCTGCAGGAGTCTGCAAGCCAGATCCAGTAC
CAGTGTGGAGACTGCCAAGAGCTCTTCCCTTCACCTGAGCTGTGGGTAGCTCATCGCAAAACTCAGCACC
TTTCCAGTGCAGCGGACGAGCCACCGTCTCCTTTGCCTCCCCCAACACCCCCACCACCACCACCACCACC
ACCACCACCACCACCACCAGAAGTCAAGATGGAACCCTACGAGTGCCCTGAGTGTTCCACCCTCTGTGCC
ACCCCTGAGGAGTTCTTGGAGCATCAGGGCACCCACTTTGACTCCCTGGAGAAAGAAGAGCACAATGGGT
TAGAAGAGGAGGAGGAAGATGAGGAAGAAGGGGAGGAGGAGGAAGACGACGATGATGAAGAGACTGATGA
GGAGGAAGCATCCTCAGAACTCACTGCTGATGACACGGGAAGCAACAAGTCCACGGCTGACTCTGCTCAG
AGTTGTGGGGATTGTCCACAGCACTGTACCTCTTCAGGGGCACGCCACAAACACCGAAGGGCATCTCACG
GCCCAGCCTCAGCCACCCATGCCTTCCACTGCAGCCAGTGTCAGCGCAGCTTCAGCTCAGCGAACCGGCT
GGTGGCTCACGGCCGGGCCCACGTGGGTGGCACCCATGAGTGTACCACTTGCTCTAAGGTCTTCAAGAAG
GCGGCCTCTCTGGAGCAGCACCAGCGGCTGCACCGTGGGGAAGCCCGCTATCTCTGTGTGGACTGTGGCC
GTGGCTTTGGCACTGAGCTCACACTTGTGGCCCATAGACGGGCCCATACTGCCAACCCACTGCACCGCTG
TCGCTGTGGCAAGACCTTCAGCAACATGACCAAGTTCCTGTACCACCGACGAACTCACACTGGGAAAAGC
GGAACCCCCACCAGGGTAGCAACTGTCTCCCCAGCTCCAGCTGAGCCCACGCCCCCACCCCTGCCCCCAC
CTGCCCAGCTGCCCTGTCCACAATGCCCCAAGTCCTTCGCCTCAGCCTCCAGGCTGTCCAGGCACCGGCG
CGCGGTGCACGGCCCCCCTGAACGCCGACACAGGTGTGGGGTCTGCGGCAAGGGCTTCAAGAAGCTCGTC
CATGTGCGCAACCATCTGCGGACACACACGGGTGAGAGGCCCTTCCAGTGTCACTCCTGCGGCAAGACCT
TCGCTTCTTTAGCCAACCTCAGCCGCCACCAGCTGACCCACACAGGAGTGCGTCCCTACCAATGCCTGGA
CTGTGGCAAGCGCTTTACACAGAGCTCCAACCTGCAGCAGCATCGGCGGCTACACCTTCGGCCTGTGGCC
TTTGCACGTGCCCCTCGCCTTCCCATCACGGGTCTCTACAACAAGAGCCCCTACTACTGTGGGACCTGCG
GCCGCTGGTTCCGCGCCATGGCAGGCCTTCGGCTGCATCAGAGGGTCCATGCCCGAGCAAGGAGTTTGAC
CCTGCAGCCTCCCAGATCACCCTCTCCGGTCCCACCCCCACCCCCTGAACCTCAGCAGACTATCATGTGC
ACAGAGCTTGGGGAGACCATCGCCATCATTGAGACATCCCAGCCGCTGGCACTCGAGGACACACTGCAGC
TATGCCAGGCAGCACTGGGGGCCAGTGAGGCGAGCGGACTGTTGCAGTTGGATACGGCCTTTGTCTGA

Translation (675 aa):
MAEMVAEAAEIPTQSSGAVEISTAVSGELAEMATAVTEMTSGEALASSLFFQHHQFMCSECGSLYNTLEE
VLSHQEQHLLTMSEEETLTTQDAGLEPELVPSTGEGPFQCGECSQLILSPSELLAHQDAHLQESASQIQY
QCGDCQELFPSPELWVAHRKTQHLSSAADEPPSPLPPPTPPPPPPPPPPPPPPEVKMEPYECPECSTLCA
TPEEFLEHQGTHFDSLEKEEHNGLEEEEEDEEEGEEEEDDDDEETDEEEASSELTADDTGSNKSTADSAQ
SCGDCPQHCTSSGARHKHRRASHGPASATHAFHCSQCQRSFSSANRLVAHGRAHVGGTHECTTCSKVFKK
AASLEQHQRLHRGEARYLCVDCGRGFGTELTLVAHRRAHTANPLHRCRCGKTFSNMTKFLYHRRTHTGKS
GTPTRVATVSPAPAEPTPPPLPPPAQLPCPQCPKSFASASRLSRHRRAVHGPPERRHRCGVCGKGFKKLV
HVRNHLRTHTGERPFQCHSCGKTFASLANLSRHQLTHTGVRPYQCLDCGKRFTQSSNLQQHRRLHLRPVA
FARAPRLPITGLYNKSPYYCGTCGRWFRAMAGLRLHQRVHARARSLTLQPPRSPSPVPPPPPEPQQTIMC
TELGETIAIIETSQPLALEDTLQLCQAALGASEASGLLQLDTAFV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH