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Report for CCDS59177.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59177.1 Public Homo sapiens X ZFP92 24 110 108 CCDS HistoryNCBI Gene:139735Re-query CCDS DB by CCDS ID:59177.1Re-query CCDS DB by GeneID:139735See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 59177.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000338647.7 ENSP00000462054.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000338647.7Link to Ensembl Protein Viewer:ENSP00000462054.1Re-query CCDS DB by Nucleotide ID:ENST00000338647Re-query CCDS DB by Protein ID:ENSP00000462054
Original member Current member NCBI NM_001136273.2 NP_001129745.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001136273.2Link to Protein Sequence:NP_001129745.1Re-query CCDS DB by Nucleotide ID:NM_001136273Re-query CCDS DB by Protein ID:NP_001129745Link to BLAST:NP_001129745.1
Original member Current member NCBI NM_001386944.1 NP_001373873.1 Accepted alive Link to Nucleotide Sequence:NM_001386944.1Link to Protein Sequence:NP_001373873.1Re-query CCDS DB by Nucleotide ID:NM_001386944Re-query CCDS DB by Protein ID:NP_001373873Link to BLAST:NP_001373873.1
Original member Current member NCBI NM_001386945.1 NP_001373874.1 Accepted alive Link to Nucleotide Sequence:NM_001386945.1Link to Protein Sequence:NP_001373874.1Re-query CCDS DB by Nucleotide ID:NM_001386945Re-query CCDS DB by Protein ID:NP_001373874Link to BLAST:NP_001373874.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129745.1 416 A6NM28 416 100% 0 0
NP_001373873.1 416 A6NM28 416 100% 0 0
NP_001373874.1 416 A6NM28 416 100% 0 0

Chromosomal Locations for CCDS 59177.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 153418323 153418355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153418673 153418799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153420228 153420332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153420643 153421628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1251 nt):
ATGGCAGCCATTCTCCTGACCACGAGACCCAAGGTGCCAGTATCTTTTGAGGATGTGTCCGTGTACTTCA
CAAAGACAGAATGGAAGCTTCTGGACCTCAGACAAAAGGTCCTCTACAAGCGGGTGATGCTGGAGAACTA
TAGCCATTTGGTGTCACTGGGATTTTCCTTCTCCAAGCCTCACCTGATCTCCCAATTGGAACGAGGGGAA
GGACCCTGGGTAGCAGACATCCCCAGAACCTGGGCCACCGCAGGATTGCACATAGGTGACAGAACACAGA
GCAAGACGTCGACTTCAACGCAGAAGCATTCTGGACGACAACTCCCCGGGGCCGATCCACAAGGTGGCAA
GGAGGGGCAGGCGGCGAGGTCGTCTGTGCTCCAGAGAGGTGCCCAGGGCTTGGGGCAGAGTTCGGCTGCG
GGGCCGCAGGGCCCCAAAGGCGCGGAGAAGCGGTACCTGTGCCAGCAGTGTGGGAAGGCCTTCAGCCGCA
GCTCCAACCTCATCAAGCACCGCATCATCCACAGTGGCGAGAAGCCTTACGCGTGCCCCGAGTGCGGCAA
GCTGTTTCGCCGCAGCTTCGCGCTCCTGGAGCACCAGCGCATCCACAGCGGCGAGAAGCCCTACGCCTGC
CCCGAGTGCAGCAAGACCTTCACGCGCAGCTCCAACCTCATCAAGCACCAGGTCATCCACAGCGGCGAGC
GGCCCTTCGCCTGCGGCGACTGCGGCAAACTGTTCCGCCGCAGCTTCGCGCTCCTGGAGCACGCGCGCGT
GCACAGCGGCGAGCGGCCCTACGCGTGCCCAGAGTGCGGCAAGGCCTTCAGCCGCAGCTCCAACCTCATC
GAGCACCAGCGCACGCACCGCGGCGAGAAGCCCTACGCCTGCGGCCAGTGCGCCAAGGCCTTCAAGGGCG
TCTCGCAGCTCATCCACCACCAGCGCAGCCACAGCGGCGAGCGGCCCTTCGCGTGCCGCGAGTGCGGCAA
GGCCTTCCGTGGCCGTTCGGGCCTCAGCCAGCACCGGCGCGTGCACAGCGGTGAGAAGCCCTACGAGTGC
AGCGACTGCGGCAAGGCCTTCGGCCGGCGCGCCAACCTATTCAAGCACCAGGCAGTGCACGGCGCCAGGC
GCCCTGCGAAGGCGGAGACGGCGCGGAGGCTAGCGGGCCCTGGGAGCACCGGCCCTGGGAGCGCGGTGGC
GGCCACCAGCCCCCCGCGGCCGAGCACAGCCGCCAGGCCTTCCAGGCCCAGCCGCCGCTGA

Translation (416 aa):
MAAILLTTRPKVPVSFEDVSVYFTKTEWKLLDLRQKVLYKRVMLENYSHLVSLGFSFSKPHLISQLERGE
GPWVADIPRTWATAGLHIGDRTQSKTSTSTQKHSGRQLPGADPQGGKEGQAARSSVLQRGAQGLGQSSAA
GPQGPKGAEKRYLCQQCGKAFSRSSNLIKHRIIHSGEKPYACPECGKLFRRSFALLEHQRIHSGEKPYAC
PECSKTFTRSSNLIKHQVIHSGERPFACGDCGKLFRRSFALLEHARVHSGERPYACPECGKAFSRSSNLI
EHQRTHRGEKPYACGQCAKAFKGVSQLIHHQRSHSGERPFACRECGKAFRGRSGLSQHRRVHSGEKPYEC
SDCGKAFGRRANLFKHQAVHGARRPAKAETARRLAGPGSTGPGSAVAATSPPRPSTAARPSRPSRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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