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Report for CCDS57384.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57384.1 Public Mus musculus 5 Tmem132b 23 108 98 CCDS HistoryNCBI Gene:208151Re-query CCDS DB by CCDS ID:57384.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57384.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000031446.6 ENSMUSP00000031446.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000031446.6Link to Ensembl Protein Viewer:ENSMUSP00000031446.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000031446Re-query CCDS DB by Protein ID:ENSMUSP00000031446
Original member NCBI NM_001190352.1 NP_001177281.1 Updated not alive Link to Nucleotide Sequence:NM_001190352.1Link to Protein Sequence:NP_001177281.1Re-query CCDS DB by Nucleotide ID:NM_001190352Re-query CCDS DB by Protein ID:NP_001177281
Current member NCBI NM_001190352.2 NP_001177281.1 Accepted alive Link to Nucleotide Sequence:NM_001190352.2Link to Protein Sequence:NP_001177281.1Re-query CCDS DB by Nucleotide ID:NM_001190352Re-query CCDS DB by Protein ID:NP_001177281Link to BLAST:NP_001177281.1

Chromosomal Locations for CCDS 57384.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 125532630 125532690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 125622461 125623352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 125638182 125638328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 125698564 125698750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 125749235 125749378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 125778637 125778842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 125783330 125783600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 125785841 125786032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 125786932 125788068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3237 nt):
ATGCGGGCCCCGGCCGCGTCGCTCGGGCTGCTGCTGGCGCTGAGCGCGCTCCGCTGCGCAGAGAGCACAG
GTCGAGGCGCTGCAGACAGCCTGCAGAGGTTTTCTTCCCTGCCCGCCTATCTCCCAGCCGGCTTCCACGT
CACCGATGCAGAAGAGGCTTTCTTCCTCAAGGAGGCCAACCAGGACCTCATGCGCAATGCCAGCCTGCAG
GCCCGATCCGCCACACTCTTCATCCACCGAGCCCAGAGCCCTCCGGCCATCAATGCCAGCTACGGTCCCT
TCTCAGTAGAGAAGACGGTGCCCTGGGACTTCCTGCTCATGCCCACTCCTTTCGGAAATATGGAGAGGTT
CCCTTTCAACTGGAGGCTCAAATCCCATATCCTCGACAGCTCCATCTTTTCCAACAGACCTAAAGTGCAG
ACACTGTTCTATGTCACTGGCATGGGCTGGGATGAAAATGACCCTGGGGATGATCTTCCGTGTGTCAAGA
TGTTTGCCTTCCCAGAGGCCAGGGAGGTGGCAGCCAGCTGCCGGCTGCAGGGGGCTCCTGGGTTGTGCGT
GGCAGAGCTGGAGTTGTTGCCTGAGTGGTTCAGCTCAGGTCTGGACCTTGAACCTCAAGAGGAGATCCCA
GCATTGCTGGGTGGCACAGCCATGGAACTCTACTTTGCACTTTATCCAGCCAACGAGGCTGGCCAGTGCC
CACTGGAGGAGGAGGGCAAATGGGAAAACAATATCCACTCAGAACAGGAGGAGCCTCAGCCAGTGCTCCC
TGCTCGGGAAAGGATCGGCAGCGTGGTGGTCTACCCTACCCAGGATGACCTGCGGTGGTCCTTGGTGACC
CTCGATGACAATGTGGCCCTTTCGATCCCTCTGAACCTCATCCGAGAAGGGGACACGGCCACCTTTTTGG
TTTCTCTCACCAGTGGCTCCCTGGCAGAGAAGTTCACTCTTCGAATCAAGGCGGCTGCAGGTGTGAAGAT
AACGGCTGTGCGGGTGAGCCACGAGGACCAGTGGGCAGTGCAGGAGGAGATTGAGCAGGACGGTACCCAG
ACCACGGCTGTCCTGTCCTGCATGGGCCACCACCCGGACACCCAGAGCAGGGCAAACGGCTCCTTCTATG
AGATTCTGCAAGTGGACTTTGGAGTCGATAACAGCAGCAGCCTTGCTGGGGCCCAGCAAATCACCTGGCA
GGTAGAATATCCTGTGGAAGACTCCATGAGTGAGCTCTTCGTCTCTGAGATCTTCATCAGCCAGACGACC
TTTGTGGGCATTGTCCCTCTCACCATGGACACAGAAATTTTGAACACCGCCATTCTCACTGGGAAGCCCG
TCTCGGTTCCCGTCAAGGTCGTGGGGGTTCAAGAAGATGGATCTGTGGTGGATGTGTTGGAGTCTGTGGA
ATGCAGGTCTGCCGATGAAGATGTTGTGAAGGTCTCCAACACCTGTGATTCTATCTTTGTGAACGGGAAG
GAGATGAAGAGCAAAGTGGGCACGATTGTCAACTTCACCCACCAGCACTTCACTTCCCAGGTGGAGATCA
CTGTCTGGGTGCCCCGCCTGCCGTTGCAGATTGAGATCTCTGATACGGAGTTGAGCCAGATCAAGGGCTG
GAGGATCCCAGTGGCATCCAACAGGAGACCCACCCGGGAAAGTGATGACGAGGAGGATGAGGAGAAGAAG
GGGCGAGGGTGTACCCTGCAGTACCAGCATGCCCTGGTGCGTGTCCTCACTCAGTTTGTATCTGAGTCAC
CTGACCTGGGTCAGCTGACCTACATGCTGGGCCCTGATTGGCAGTTTGACATCACCAACCTGGTAACCGA
GTTTGTGAAGGTGGAGGAGCCAAAAATTGCCCAGTTACAGAATGGCAGGATCCTGGCAGGACGGGAGCCG
GGCATCACCACTGTGCAGGTCCTCTCGCCTCTCTCTGACTCCATCCTTGCAGAGAAGACGGTTATTGTCC
TCGATGACCGGGTCACCATCACAGAGCTGGGTGTACAACTGGTGGCTGGCCTGTCCCTTTCCCTGCAGCC
TCACAGGGCAGACAAAAGGGCCATCGTCTCCACGGTGGCTGCTCAGGACGTTCTCCAAGCCCCACAGCAG
GAAGCCATAGTCAGTTCTTGGATTTTGTTCAGTGATGGCGCTGTGACACCTTTAGATATTTACGATCTCA
AGGATTTCTCAGTGACCGTTTCCTCATTGGACGAGATGGTGGTGTCCGTCCAGCCAAACCTTCAGACCAG
ATGGCCAATCGTGGTTGCCGAGGGTGAAGGACAAGGGCCCCTGATCAAGCTGGAAATGTCCATCAGCGAG
TCTTGTCAGAAGAACAAGAGGAAGAGTACCCTTGCCGTGGGCAAAGGAAACGTCAAGGTGAGGTTTGAAC
CTGGGATGCACGAGCAGCAAGGAGGCAGCAATGACATCGGTGGCATAAACCGGGAGTACAAAGGCCATCT
CAGCAATTCCATAGAGCGCGAGGGAAGCCAGGAGCGAGCAGCCCAGGAGTGGTTCCAACACGGCACACCG
GTTGGCCACGAGGACAGGACCAACAAGAGCACAACCCCACAGTCTCCAATGGGAGGAAAACTCCTCAAAG
CGGGAGCAGATGCCTTCACCAGCTTCCCCACCCAAGGGAAGTTACCAGAATCCAGTAACCCCGGTGACCT
CACGATGACCTCCAGGGGGTTAACGGATTTGGAGATCGGAATGTACGCCCTGCTCTGTGTCTTCTGCTTG
GCCATCTTGGTCTTCCTGATCAACTGCGTGGCCTTTGCTTGGAAGTATAGGCACAAAAGGTTCGCGGTGA
GCGAGCAAGGCAACATCCCGCATTCTCACGACTGGGTGTGGCTCGGGAATGAGGTAGAGCTCCTGGAGAA
CCCTGTGGACATCACTCTCCCCTCGGAGGAGTGCACAACCATGATTGACAGGGGTCTGCAGTTCGAGGAG
AGGAACTTCCTGCTGAATGGCAGCTCCCAGAAGACTTTCCATAGTCAACTGCTTAGACCCCCTGACTATG
TGTATGAGAAAGAGCTGAAAAATGAACCTATGGGTTCCTCCGGCCCAAAGAGGAAGAGAGTCAAGTTTAC
TTCCTACACCACCATCCTCCCCGAGGATGGGGGCCCATACACCAACTCTATCCTGTTTGACAGTGATGAC
AGCATCAAGTGGGTCTGCCAGGATATGGGGCTGGGGGACTCGCAGGACTTCAGAGACTACATGGAAAGAC
TACAGGACCAGATGTAA

Translation (1078 aa):
MRAPAASLGLLLALSALRCAESTGRGAADSLQRFSSLPAYLPAGFHVTDAEEAFFLKEANQDLMRNASLQ
ARSATLFIHRAQSPPAINASYGPFSVEKTVPWDFLLMPTPFGNMERFPFNWRLKSHILDSSIFSNRPKVQ
TLFYVTGMGWDENDPGDDLPCVKMFAFPEAREVAASCRLQGAPGLCVAELELLPEWFSSGLDLEPQEEIP
ALLGGTAMELYFALYPANEAGQCPLEEEGKWENNIHSEQEEPQPVLPARERIGSVVVYPTQDDLRWSLVT
LDDNVALSIPLNLIREGDTATFLVSLTSGSLAEKFTLRIKAAAGVKITAVRVSHEDQWAVQEEIEQDGTQ
TTAVLSCMGHHPDTQSRANGSFYEILQVDFGVDNSSSLAGAQQITWQVEYPVEDSMSELFVSEIFISQTT
FVGIVPLTMDTEILNTAILTGKPVSVPVKVVGVQEDGSVVDVLESVECRSADEDVVKVSNTCDSIFVNGK
EMKSKVGTIVNFTHQHFTSQVEITVWVPRLPLQIEISDTELSQIKGWRIPVASNRRPTRESDDEEDEEKK
GRGCTLQYQHALVRVLTQFVSESPDLGQLTYMLGPDWQFDITNLVTEFVKVEEPKIAQLQNGRILAGREP
GITTVQVLSPLSDSILAEKTVIVLDDRVTITELGVQLVAGLSLSLQPHRADKRAIVSTVAAQDVLQAPQQ
EAIVSSWILFSDGAVTPLDIYDLKDFSVTVSSLDEMVVSVQPNLQTRWPIVVAEGEGQGPLIKLEMSISE
SCQKNKRKSTLAVGKGNVKVRFEPGMHEQQGGSNDIGGINREYKGHLSNSIEREGSQERAAQEWFQHGTP
VGHEDRTNKSTTPQSPMGGKLLKAGADAFTSFPTQGKLPESSNPGDLTMTSRGLTDLEIGMYALLCVFCL
AILVFLINCVAFAWKYRHKRFAVSEQGNIPHSHDWVWLGNEVELLENPVDITLPSEECTTMIDRGLQFEE
RNFLLNGSSQKTFHSQLLRPPDYVYEKELKNEPMGSSGPKRKRVKFTSYTTILPEDGGPYTNSILFDSDD
SIKWVCQDMGLGDSQDFRDYMERLQDQM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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