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Report for CCDS90996.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90996.1 Public Homo sapiens 1 ODF2L 24 110 108 CCDS HistoryNCBI Gene:57489Re-query CCDS DB by CCDS ID:90996.1Re-query CCDS DB by GeneID:57489See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90996.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000696297.1 ENSP00000512536.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000696297.1Link to Ensembl Protein Viewer:ENSP00000512536.1Re-query CCDS DB by Nucleotide ID:ENST00000696297Re-query CCDS DB by Protein ID:ENSP00000512536
Original member Current member NCBI NM_001395534.1 NP_001382463.1 Accepted alive Link to Nucleotide Sequence:NM_001395534.1Link to Protein Sequence:NP_001382463.1Re-query CCDS DB by Nucleotide ID:NM_001395534Re-query CCDS DB by Protein ID:NP_001382463Link to BLAST:NP_001382463.1
Original member Current member NCBI NM_001395535.1 NP_001382464.1 Accepted alive Link to Nucleotide Sequence:NM_001395535.1Link to Protein Sequence:NP_001382464.1Re-query CCDS DB by Nucleotide ID:NM_001395535Re-query CCDS DB by Protein ID:NP_001382464Link to BLAST:NP_001382464.1
Original member Current member NCBI NM_001395536.1 NP_001382465.1 Accepted alive Link to Nucleotide Sequence:NM_001395536.1Link to Protein Sequence:NP_001382465.1Re-query CCDS DB by Nucleotide ID:NM_001395536Re-query CCDS DB by Protein ID:NP_001382465Link to BLAST:NP_001382465.1
Original member Current member NCBI NM_001395537.1 NP_001382466.1 Accepted alive Link to Nucleotide Sequence:NM_001395537.1Link to Protein Sequence:NP_001382466.1Re-query CCDS DB by Nucleotide ID:NM_001395537Re-query CCDS DB by Protein ID:NP_001382466Link to BLAST:NP_001382466.1

Chromosomal Locations for CCDS 90996.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 86348750 86348878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 86352859 86352984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 86354530 86354692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 86354774 86354859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 86358787 86358891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 86360426 86360536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 86371018 86371153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 86372431 86372540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 86376233 86376418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 86382242 86382358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 86382931 86383002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 86383134 86383175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1383 nt):
ATGTTGCTAGAAAATCTAACTGATAATGAAAGTGAAAATACTAATCTTAAGAAGAAGGTATTTGAAAAGG
AGGCCCATATCCAAGAACTTTCTTGTTTGTTTCAGAGTGAAAAGGCAAATACTTTGAAAGCAAACCGTTT
TTCCCAATCAGTAAAAGTAGTACATGAACGACTACAGATCCAAATTCATAAAAGGGAAGCCGAGAACGAT
AAGTTGAAAGAATATGTAAAGAGCTTAGAAACCAAGATAGCCAAGTGGAACCTGCAATCAAGAATGAATA
AGAATGAGGCTATAGTGATGAAAGAAGCAAGTAGGCAAAAAACTGTAGCTTTAAAAAAGGCATCTAAAGT
TTACAAACAAAGGCTTGACCATTTTACAGGAGCTATTGAAAAGCTTACTTCCCAAATTAGAGATCAGGAA
GCCAAGTTGTCTGAAACAATTTCAGCTTCCAATGCCTGGAAAAGTCATTATGAGAAAATTGTGATAGAAA
AAACCGAATTGGAAGTACAGATTGAAACAATGAAAAAGCAAATCATTAATCTTTTGGAAGATCTGAAGAA
AATGGAAGACCATGGAAAAAATTCATGTGAAGAAATTCTTAGAAAAGTTCACTCAATTGAATATGAAAAT
GAAACTCTGAATCTTGAGAATACAAAATTAAAGACTACACTTGCTGCTTTGAAGGATGAAGTTGTATCTG
TTGAAAATGAACTCTCAGAATTGCAAGAAGTAGAAAAAAAACAGAAAACCCTTATTGAAATGTATAAAAC
TCAGGTACAAAAGTTGCAAGAAGCAGCTGAAATAGTAAAAAGCAGATGTGAAAATTTGCTACATAAAAAT
AACCAAATAACAAAAACCAAAAATAAAAATGTAGAGAAGGTTGATGGAAATCACAATCTTCTGACAAAGC
TTTCTCTGGAAGAGGAAAACTGTCTTATTCAGCTGAAGTGTGAAAACCTTCAACAAAAATTAGAACAGAT
GGACGCAGAAAATAAAGAGCTTGAGAAGAAGCTGGCAAACCAAGAAGAATGTCTTAAGCACAGCAATCTT
AAGTTTAAAGAGAAATCTGCAGAGTATACAGCATTGGCCAGACAACTGGAAGCTGCTTTAGAAGAAGGAA
GACAAAAGGTTGCTGAAGAAATAGAGAAAATGTCATCTAGAGAGAGTGCTTTACAAATTAAAATATTAGA
TCTGGAAACTGAGCTTAGAAAGAAAAATGAAGAACAAAATCAACTTGTTTGCAAAATGAACAGTAAAGCA
CAACATCAGGAAGTGTGTTTGAAAGAAGTACAAAATAGTCTTGAGAAGTCGGAAAATCAAAATGAGAGTA
TTAAGAATTATTTACAGTTTCTTAAAACTTCTTATGTAACAATGTTTGAATAA

Translation (460 aa):
MLLENLTDNESENTNLKKKVFEKEAHIQELSCLFQSEKANTLKANRFSQSVKVVHERLQIQIHKREAEND
KLKEYVKSLETKIAKWNLQSRMNKNEAIVMKEASRQKTVALKKASKVYKQRLDHFTGAIEKLTSQIRDQE
AKLSETISASNAWKSHYEKIVIEKTELEVQIETMKKQIINLLEDLKKMEDHGKNSCEEILRKVHSIEYEN
ETLNLENTKLKTTLAALKDEVVSVENELSELQEVEKKQKTLIEMYKTQVQKLQEAAEIVKSRCENLLHKN
NQITKTKNKNVEKVDGNHNLLTKLSLEEENCLIQLKCENLQQKLEQMDAENKELEKKLANQEECLKHSNL
KFKEKSAEYTALARQLEAALEEGRQKVAEEIEKMSSRESALQIKILDLETELRKKNEEQNQLVCKMNSKA
QHQEVCLKEVQNSLEKSENQNESIKNYLQFLKTSYVTMFE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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