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Report for CCDS32420.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32420.1 Public Homo sapiens 16 SULT1A1 24 110 108 CCDS HistoryNCBI Gene:6817Re-query CCDS DB by CCDS ID:32420.1Re-query CCDS DB by GeneID:6817See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 32420.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000314752.12 ENSP00000321988.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000314752.12Link to Ensembl Protein Viewer:ENSP00000321988.7Re-query CCDS DB by Nucleotide ID:ENST00000314752Re-query CCDS DB by Protein ID:ENSP00000321988
Original member Current member EBI ENST00000569554.5 ENSP00000457912.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000569554.5Link to Ensembl Protein Viewer:ENSP00000457912.1Re-query CCDS DB by Nucleotide ID:ENST00000569554Re-query CCDS DB by Protein ID:ENSP00000457912
Original member Current member NCBI NM_001055.4 NP_001046.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001055.4Link to Protein Sequence:NP_001046.2Re-query CCDS DB by Nucleotide ID:NM_001055Re-query CCDS DB by Protein ID:NP_001046Link to BLAST:NP_001046.2
Original member Current member NCBI NM_001394421.1 NP_001381350.1 Accepted alive Link to Nucleotide Sequence:NM_001394421.1Link to Protein Sequence:NP_001381350.1Re-query CCDS DB by Nucleotide ID:NM_001394421Re-query CCDS DB by Protein ID:NP_001381350Link to BLAST:NP_001381350.1
Original member Current member NCBI NM_001394422.1 NP_001381351.1 Accepted alive Link to Nucleotide Sequence:NM_001394422.1Link to Protein Sequence:NP_001381351.1Re-query CCDS DB by Nucleotide ID:NM_001394422Re-query CCDS DB by Protein ID:NP_001381351Link to BLAST:NP_001381351.1
Original member Current member NCBI NM_001394423.1 NP_001381352.1 Accepted alive Link to Nucleotide Sequence:NM_001394423.1Link to Protein Sequence:NP_001381352.1Re-query CCDS DB by Nucleotide ID:NM_001394423Re-query CCDS DB by Protein ID:NP_001381352Link to BLAST:NP_001381352.1
Original member Current member NCBI NM_001394424.1 NP_001381353.1 Accepted alive Link to Nucleotide Sequence:NM_001394424.1Link to Protein Sequence:NP_001381353.1Re-query CCDS DB by Nucleotide ID:NM_001394424Re-query CCDS DB by Protein ID:NP_001381353Link to BLAST:NP_001381353.1
Original member Current member NCBI NM_001394425.1 NP_001381354.1 Accepted alive Link to Nucleotide Sequence:NM_001394425.1Link to Protein Sequence:NP_001381354.1Re-query CCDS DB by Nucleotide ID:NM_001394425Re-query CCDS DB by Protein ID:NP_001381354Link to BLAST:NP_001381354.1
Original member Current member NCBI NM_177529.3 NP_803565.1 Accepted alive Link to Nucleotide Sequence:NM_177529.3Link to Protein Sequence:NP_803565.1Re-query CCDS DB by Nucleotide ID:NM_177529Re-query CCDS DB by Protein ID:NP_803565Link to BLAST:NP_803565.1
Original member Current member NCBI NM_177530.4 NP_803566.1 Accepted alive Link to Nucleotide Sequence:NM_177530.4Link to Protein Sequence:NP_803566.1Re-query CCDS DB by Nucleotide ID:NM_177530Re-query CCDS DB by Protein ID:NP_803566Link to BLAST:NP_803566.1
Original member Current member NCBI NM_177534.4 NP_803878.1 Accepted alive Link to Nucleotide Sequence:NM_177534.4Link to Protein Sequence:NP_803878.1Re-query CCDS DB by Nucleotide ID:NM_177534Re-query CCDS DB by Protein ID:NP_803878Link to BLAST:NP_803878.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001046.2 295 P50225-1 295 100% 0 0
NP_001381350.1 295 P50225-1 295 100% 0 0
NP_001381351.1 295 P50225-1 295 100% 0 0
NP_001381352.1 295 P50225-1 295 100% 0 0
NP_001381353.1 295 P50225-1 295 100% 0 0
NP_001381354.1 295 P50225-1 295 100% 0 0
NP_803565.1 295 P50225-1 295 100% 0 0
NP_803566.1 295 P50225-1 295 100% 0 0
NP_803878.1 295 P50225-1 295 100% 0 0

Chromosomal Locations for CCDS 32420.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 28605821 28605933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28606056 28606236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28606761 28606855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28606951 28607077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28608291 28608388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28608478 28608603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28608708 28608855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (888 nt):
ATGGAGCTGATCCAGGACACCTCCCGCCCGCCACTGGAGTACGTGAAGGGGGTCCCGCTCATCAAGTACT
TTGCAGAGGCACTGGGGCCCCTGCAGAGCTTCCAGGCCCGGCCTGATGACCTGCTCATCAGCACCTACCC
CAAGTCCGGCACTACCTGGGTAAGCCAGATTCTGGACATGATCTACCAGGGTGGTGACCTGGAGAAGTGT
CACCGAGCTCCCATCTTCATGCGGGTGCCCTTCCTTGAGTTCAAAGCCCCAGGGATTCCCTCAGGGATGG
AGACTCTGAAAGACACACCGGCCCCACGACTCCTGAAGACACACCTGCCCCTGGCTCTGCTCCCCCAGAC
TCTGTTGGATCAGAAGGTCAAGGTGGTCTATGTTGCCCGCAACGCAAAGGATGTGGCAGTTTCCTACTAC
CACTTCTACCACATGGCCAAGGTGCACCCTGAGCCTGGGACCTGGGACAGCTTCCTGGAGAAGTTCATGG
TCGGAGAAGTGTCCTACGGATCCTGGTACCAGCACGTGCAGGAGTGGTGGGAGCTGAGCCGCACCCACCC
TGTTCTCTACCTCTTCTATGAAGACATGAAGGAGAACCCGAAAAGGGAGATTCAAAAGATCCTGGAGTTT
GTGGGGCGCTCCCTGCCAGAGGAGACCGTGGACTTCGTGGTTCAGCACACGTCGTTCAAGGAGATGAAGA
AGAACCCTATGACCAACTACACCACCGTCCCCCAGGAGTTCATGGACCACAGCATCTCCCCCTTCATGAG
GAAAGGCATGGCTGGGGACTGGAAGACCACCTTCACCGTGGCGCAGAATGAGCGCTTCGATGCGGACTAT
GCGGAGAAGATGGCAGGCTGCAGCCTCAGCTTCCGCTCTGAGCTGTGA

Translation (295 aa):
MELIQDTSRPPLEYVKGVPLIKYFAEALGPLQSFQARPDDLLISTYPKSGTTWVSQILDMIYQGGDLEKC
HRAPIFMRVPFLEFKAPGIPSGMETLKDTPAPRLLKTHLPLALLPQTLLDQKVKVVYVARNAKDVAVSYY
HFYHMAKVHPEPGTWDSFLEKFMVGEVSYGSWYQHVQEWWELSRTHPVLYLFYEDMKENPKREIQKILEF
VGRSLPEETVDFVVQHTSFKEMKKNPMTNYTTVPQEFMDHSISPFMRKGMAGDWKTTFTVAQNERFDADY
AEKMAGCSLSFRSEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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