NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS11730.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11730.1 Public Homo sapiens 17 UNC13D 24 110 108 CCDS HistoryNCBI Gene:201294Re-query CCDS DB by CCDS ID:11730.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11730.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000207549.9 ENSP00000207549.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000207549.9Link to Ensembl Protein Viewer:ENSP00000207549.3Re-query CCDS DB by Nucleotide ID:ENST00000207549Re-query CCDS DB by Protein ID:ENSP00000207549
Original member Current member NCBI NM_199242.3 NP_954712.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_199242.3Link to Protein Sequence:NP_954712.1Re-query CCDS DB by Nucleotide ID:NM_199242Re-query CCDS DB by Protein ID:NP_954712Link to BLAST:NP_954712.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_954712.1 1090 Q70J99-1 1090 100% 0 0

Chromosomal Locations for CCDS 11730.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 75827965 75828086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75828787 75828983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75830028 75830151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75830362 75830482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75830578 75830661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75831098 75831169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75831243 75831348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75832966 75833045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75834075 75834143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75834325 75834531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75834618 75834716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75834920 75835063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75835409 75835529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75835647 75835777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75835855 75835906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75836012 75836109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75836200 75836256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75836339 75836429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75836572 75836696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75836801 75836918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75839839 75839942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75840018 75840110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75840225 75840329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75840507 75840576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75840762 75840830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75840957 75841001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75842433 75842613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75842857 75842923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75843014 75843073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75843159 75843266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75843484 75843519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75844221 75844337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3273 nt):
ATGGCGACACTCCTCTCCCATCCGCAGCAGCGCCCTCCCTTCTTGCGCCAGGCCATCAAGATAAGGCGCC
GCAGAGTCAGAGATCTACAGGATCCCCCGCCCCAAATGGCCCCGGAGATCCAGCCTCCATCCCACCACTT
CTCCCCCGAGCAGCGGGCCCTGCTCTACGAGGACGCACTCTACACTGTCTTGCACCGCCTGGGTCATCCT
GAGCCCAACCATGTGACGGAGGCCTCTGAGCTGCTGCGATACCTGCAGGAGGCCTTCCACGTGGAGCCCG
AGGAGCACCAGCAGACACTGCAGCGGGTCAGGGAGCTTGAGAAGCCAATATTTTGTCTGAAGGCAACAGT
GAAACAGGCCAAGGGCATTCTGGGCAAAGATGTCAGTGGGTTCAGCGACCCCTACTGCCTGCTGGGCATT
GAGCAGGGGGTAGGTGTGCCAGGGGGCAGCCCCGGGTCCCGGCATCGGCAGAAGGCTGTGGTGAGGCACA
CCATCCCCGAGGAGGAGACCCACCGCACGCAGGTCATCACCCAGACACTCAACCCCGTCTGGGACGAGAC
CTTCATCCTGGAGTTTGAGGACATCACCAATGCGAGCTTTCATCTGGACATGTGGGACCTGGACACTGTG
GAGTCTGTCCGACAGAAGCTTGGGGAGCTCACGGATCTGCATGGGCTTCGCAGGATCTTTAAAGAGGCCC
GGAAGGACAAAGGCCAGGACGACTTTCTGGGGAACGTGGTTCTGAGGCTGCAGGACCTGCGCTGCCGAGA
GGACCAGTGGTACCCCCTGGAACCCCGCACTGAGACCTACCCAGACCGAGGCCAGTGCCACCTCCAGTTC
CAACTCATCCATAAGCGGAGAGCCACTTCGGCCAGCCGCTCGCAGCCGAGCTACACCGTGCACCTCCACC
TCCTGCAGCAGCTTGTGTCCCACGAGGTCACCCAGCACGAGGCGGGAAGCACCTCCTGGGACGGGTCGCT
GAGTCCCCAGGCTGCCACCGTCCTCTTTCTGCACGCCACACAGAAGGACCTATCCGACTTCCACCAGTCC
ATGGCGCAGTGGCTGGCCTACAGCCGCCTCTACCAGAGCCTGGAGTTCCCCAGCAGCTGCCTCCTGCACC
CCATCACCAGCATCGAGTACCAGTGGATCCAGGGTCGGCTCAAGGCAGAACAGCAGGAGGAGCTGGCCGC
CTCATTCAGCTCCCTGCTGACCTACGGCCTCTCCCTCATCCGGAGGTTCCGCTCTGTCTTCCCCCTCTCT
GTCTCGGACTCCCCAGCCCGGCTGCAGTCTCTTCTCAGGGTCCTGGTACAGATGTGCAAGATGAAGGCCT
TTGGAGAACTGTGCCCCAACACCGCCCCATTGCCCCAGCTGGTGACTGAGGCCCTGCAGACTGGCACCAC
TGAATGGTTCCACCTGAAGCAGCAGCACCATCAACCCATGGTGCAGGGCATCCCGGAGGCAGGCAAGGCC
TTGCTGGGCCTGGTACAGGATGTCATTGGCGACCTGCACCAGTGCCAGCGCACATGGGACAAGATCTTCC
ACAATACCCTCAAGATCCACCTCTTCTCCATGGCTTTCCGGGAGCTGCAGTGGCTGGTGGCCAAGCGGGT
GCAGGACCACACGACGGTTGTGGGTGATGTAGTGTCCCCAGAGATGGGCGAGAGTCTGTTCCAGCTCTAC
ATCAGCCTCAAGGAGCTCTGCCAGCTGCGCATGAGCTCCTCAGAGAGGGATGGAGTCCTGGCCCTGGATA
ATTTCCACCGCTGGTTCCAGCCGGCCATCCCCTCCTGGCTGCAGAAGACGTACAACGAGGCCCTGGCGCG
GGTGCAGCGCGCTGTGCAGATGGATGAGCTGGTGCCCCTGGGTGAACTGACCAAGCACAGCACATCAGCG
GTGGATCTATCCACCTGCTTTGCCCAGATCAGCCACACTGCCCGGCAGCTGGACTGGCCAGACCCAGAGG
AGGCCTTCATGATTACCGTCAAGTTTGTGGAGGACACCTGTCGCCTGGCCCTGGTGTACTGCAGCCTTAT
AAAGGCCCGGGCCCGCGAGCTCTCTTCAGGCCAGAAGGACCAAGGCCAGGCAGCCAACATGCTGTGTGTG
GTGGTGAATGACATGGAGCAGCTGCGGCTGGTGATCGGCAAGTTGCCCGCCCAGCTGGCATGGGAGGCCC
TGGAGCAGCGGGTAGGGGCCGTGCTGGAGCAGGGGCAGCTGCAGAACACGCTGCATGCCCAGCTGCAGAG
CGCGCTGGCCGGGCTGGGCCATGAGATCCGCACTGGCGTCCGCACCCTGGCCGAGCAGTTGGAGGTGGGC
ATCGCCAAGCACATCCAGAAACTGGTGGGCGTCAGGGAGTCTGTCCTGCCTGAGGATGCCATTCTGCCCC
TGATGAAGTTCCTGGAGGTGGAGCTTTGCTACATGAACACCAACTTGGTGCAGGAGAACTTCAGCAGCCT
CCTGACCCTGCTCTGGACCCACACACTCACAGTGCTGGTGGAGGCGGCCGCCTCCCAGCGCAGCTCATCC
CTGGCTTCCAACAGGCTGAAGATTGCCCTGCAGAACCTGGAGATCTGCTTCCACGCTGAGGGCTGTGGCC
TGCCACCCAAGGCCCTGCACACTGCCACCTTCCAGGCTCTGCAGAGGGACCTGGAGCTGCAGGCGGCCTC
CAGCCGGGAACTCATCCGGAAGTACTTCTGCAGCCGAATCCAGCAGCAGGCAGAAACCACCTCTGAGGAG
CTGGGGGCTGTGACAGTCAAGGCCTCCTACCGCGCCTCTGAGCAGAAGCTGCGTGTGGAGCTGCTCAGCG
CCTCCAGCCTGCTGCCCCTGGACTCCAATGGCTCCAGCGACCCCTTTGTCCAGCTGACCTTGGAGCCCAG
GCATGAGTTCCCTGAGCTGGCCGCCCGGGAGACCCAGAAGCACAAGAAGGACCTTCACCCATTGTTTGAT
GAGACCTTTGAATTCCTGGTGCCTGCTGAGCCGTGCCGCAAGGCTGGGGCATGCCTCCTGCTCACCGTGC
TGGACTACGACACGCTGGGGGCCGACGACCTGGAAGGCGAGGCCTTCCTGCCGCTGCGTGAGGTGCCCGG
GCTGAGTGGCTCTGAGGAGCCTGGTGAGGTGCCTCAGACCCGCCTGCCCCTCACGTACCCCGCACCCAAC
GGGGACCCAATCCTGCAGCTGCTGGAGGGCCGGAAGGGTGACCGAGAAGCCCAGGTCTTTGTGAGGCTGC
GGCGGCACCGGGCCAAGCAGGCCTCCCAGCATGCCTTGCGGCCGGCACCGTAG

Translation (1090 aa):
MATLLSHPQQRPPFLRQAIKIRRRRVRDLQDPPPQMAPEIQPPSHHFSPEQRALLYEDALYTVLHRLGHP
EPNHVTEASELLRYLQEAFHVEPEEHQQTLQRVRELEKPIFCLKATVKQAKGILGKDVSGFSDPYCLLGI
EQGVGVPGGSPGSRHRQKAVVRHTIPEEETHRTQVITQTLNPVWDETFILEFEDITNASFHLDMWDLDTV
ESVRQKLGELTDLHGLRRIFKEARKDKGQDDFLGNVVLRLQDLRCREDQWYPLEPRTETYPDRGQCHLQF
QLIHKRRATSASRSQPSYTVHLHLLQQLVSHEVTQHEAGSTSWDGSLSPQAATVLFLHATQKDLSDFHQS
MAQWLAYSRLYQSLEFPSSCLLHPITSIEYQWIQGRLKAEQQEELAASFSSLLTYGLSLIRRFRSVFPLS
VSDSPARLQSLLRVLVQMCKMKAFGELCPNTAPLPQLVTEALQTGTTEWFHLKQQHHQPMVQGIPEAGKA
LLGLVQDVIGDLHQCQRTWDKIFHNTLKIHLFSMAFRELQWLVAKRVQDHTTVVGDVVSPEMGESLFQLY
ISLKELCQLRMSSSERDGVLALDNFHRWFQPAIPSWLQKTYNEALARVQRAVQMDELVPLGELTKHSTSA
VDLSTCFAQISHTARQLDWPDPEEAFMITVKFVEDTCRLALVYCSLIKARARELSSGQKDQGQAANMLCV
VVNDMEQLRLVIGKLPAQLAWEALEQRVGAVLEQGQLQNTLHAQLQSALAGLGHEIRTGVRTLAEQLEVG
IAKHIQKLVGVRESVLPEDAILPLMKFLEVELCYMNTNLVQENFSSLLTLLWTHTLTVLVEAAASQRSSS
LASNRLKIALQNLEICFHAEGCGLPPKALHTATFQALQRDLELQAASSRELIRKYFCSRIQQQAETTSEE
LGAVTVKASYRASEQKLRVELLSASSLLPLDSNGSSDPFVQLTLEPRHEFPELAARETQKHKKDLHPLFD
ETFEFLVPAEPCRKAGACLLLTVLDYDTLGADDLEGEAFLPLREVPGLSGSEEPGEVPQTRLPLTYPAPN
GDPILQLLEGRKGDREAQVFVRLRRHRAKQASQHALRPAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH