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Report for CCDS10783.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10783.1 Public Homo sapiens 16 DOK4 24 110 108 CCDS HistoryNCBI Gene:55715Re-query CCDS DB by CCDS ID:10783.1Re-query CCDS DB by GeneID:55715See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10783.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000340099.10 ENSP00000344277.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000340099.10Link to Ensembl Protein Viewer:ENSP00000344277.4Re-query CCDS DB by Nucleotide ID:ENST00000340099Re-query CCDS DB by Protein ID:ENSP00000344277
Original member Current member EBI ENST00000569548.5 ENSP00000455128.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000569548.5Link to Ensembl Protein Viewer:ENSP00000455128.1Re-query CCDS DB by Nucleotide ID:ENST00000569548Re-query CCDS DB by Protein ID:ENSP00000455128
Original member Current member NCBI NM_001369619.1 NP_001356548.1 Accepted alive Link to Nucleotide Sequence:NM_001369619.1Link to Protein Sequence:NP_001356548.1Re-query CCDS DB by Nucleotide ID:NM_001369619Re-query CCDS DB by Protein ID:NP_001356548Link to BLAST:NP_001356548.1
Original member Current member NCBI NM_001369621.1 NP_001356550.1 Accepted alive Link to Nucleotide Sequence:NM_001369621.1Link to Protein Sequence:NP_001356550.1Re-query CCDS DB by Nucleotide ID:NM_001369621Re-query CCDS DB by Protein ID:NP_001356550Link to BLAST:NP_001356550.1
Original member Current member NCBI NM_001394657.1 NP_001381586.1 Accepted alive Link to Nucleotide Sequence:NM_001394657.1Link to Protein Sequence:NP_001381586.1Re-query CCDS DB by Nucleotide ID:NM_001394657Re-query CCDS DB by Protein ID:NP_001381586Link to BLAST:NP_001381586.1
Original member Current member NCBI NM_001394658.1 NP_001381587.1 Accepted alive Link to Nucleotide Sequence:NM_001394658.1Link to Protein Sequence:NP_001381587.1Re-query CCDS DB by Nucleotide ID:NM_001394658Re-query CCDS DB by Protein ID:NP_001381587Link to BLAST:NP_001381587.1
Original member Current member NCBI NM_001394659.1 NP_001381588.1 Accepted alive Link to Nucleotide Sequence:NM_001394659.1Link to Protein Sequence:NP_001381588.1Re-query CCDS DB by Nucleotide ID:NM_001394659Re-query CCDS DB by Protein ID:NP_001381588Link to BLAST:NP_001381588.1
Original member Current member NCBI NM_001394660.1 NP_001381589.1 Accepted alive Link to Nucleotide Sequence:NM_001394660.1Link to Protein Sequence:NP_001381589.1Re-query CCDS DB by Nucleotide ID:NM_001394660Re-query CCDS DB by Protein ID:NP_001381589Link to BLAST:NP_001381589.1
Original member Current member NCBI NM_001394661.1 NP_001381590.1 Accepted alive Link to Nucleotide Sequence:NM_001394661.1Link to Protein Sequence:NP_001381590.1Re-query CCDS DB by Nucleotide ID:NM_001394661Re-query CCDS DB by Protein ID:NP_001381590Link to BLAST:NP_001381590.1
Original member Current member NCBI NM_018110.5 NP_060580.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018110.5Link to Protein Sequence:NP_060580.2Re-query CCDS DB by Nucleotide ID:NM_018110Re-query CCDS DB by Protein ID:NP_060580Link to BLAST:NP_060580.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001356548.1 326 Q8TEW6 326 100% 0 0
NP_001356550.1 326 Q8TEW6 326 100% 0 0
NP_001381586.1 326 Q8TEW6 326 100% 0 0
NP_001381587.1 326 Q8TEW6 326 100% 0 0
NP_001381588.1 326 Q8TEW6 326 100% 0 0
NP_001381589.1 326 Q8TEW6 326 100% 0 0
NP_001381590.1 326 Q8TEW6 326 100% 0 0
NP_060580.2 326 Q8TEW6 326 100% 0 0

Chromosomal Locations for CCDS 10783.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 57473377 57473495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57473613 57473736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57473901 57474039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57474793 57474982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57475100 57475219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57475506 57475620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57475850 57475957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57479442 57479507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (981 nt):
ATGGCGACCAATTTCAGTGACATCGTCAAGCAAGGCTACGTGAAGATGAAGAGCAGGAAGCTCGGGATCT
ACCGGAGGTGCTGGCTGGTGTTCCGGAAATCCTCCAGCAAGGGGCCCCAGCGGCTGGAGAAGTATCCAGA
TGAGAAGTCGGTGTGCCTCCGGGGCTGCCCCAAGGTGACTGAGATCAGCAACGTCAAGTGTGTTACGCGG
CTCCCCAAGGAGACCAAGCGGCAGGCGGTGGCCATCATATTCACTGATGACTCGGCACGTACCTTCACCT
GCGACTCAGAGCTAGAGGCAGAGGAGTGGTACAAGACACTATCTGTGGAGTGTCTGGGGTCCCGCCTCAA
CGACATCAGTCTGGGAGAACCTGACCTCCTGGCCCCAGGGGTGCAGTGTGAACAGACAGATCGCTTCAAT
GTCTTCCTGCTGCCCTGCCCCAACCTGGACGTGTATGGCGAGTGCAAGCTGCAGATCACCCACGAGAACA
TCTACCTCTGGGACATCCACAACCCCCGTGTGAAGCTCGTCTCGTGGCCCCTCTGCTCACTGCGCCGCTA
TGGCCGGGATGCCACACGCTTTACCTTCGAGGCTGGCCGGATGTGTGATGCTGGGGAAGGACTCTATACC
TTCCAGACACAAGAGGGGGAGCAGATTTACCAGCGCGTCCACAGTGCCACCCTGGCCATCGCAGAGCAGC
ACAAGCGGGTCCTGCTGGAAATGGAGAAGAACGTGAGGCTGCTGAACAAGGGCACGGAACATTACTCGTA
TCCCTGCACACCCACGACCATGCTGCCGCGCAGTGCCTACTGGCACCACATCACTGGTTCCCAGAACATC
GCCGAAGCCTCCAGCTATGCTGGTGAGGGGTATGGGGCAGCCCAGGCCAGCTCGGAAACAGACCTCCTCA
ACAGATTCATCCTGCTAAAGCCAAAGCCCAGCCAGGGGGACAGCAGTGAGGCCAAGACCCCATCCCAGTG
A

Translation (326 aa):
MATNFSDIVKQGYVKMKSRKLGIYRRCWLVFRKSSSKGPQRLEKYPDEKSVCLRGCPKVTEISNVKCVTR
LPKETKRQAVAIIFTDDSARTFTCDSELEAEEWYKTLSVECLGSRLNDISLGEPDLLAPGVQCEQTDRFN
VFLLPCPNLDVYGECKLQITHENIYLWDIHNPRVKLVSWPLCSLRRYGRDATRFTFEAGRMCDAGEGLYT
FQTQEGEQIYQRVHSATLAIAEQHKRVLLEMEKNVRLLNKGTEHYSYPCTPTTMLPRSAYWHHITGSQNI
AEASSYAGEGYGAAQASSETDLLNRFILLKPKPSQGDSSEAKTPSQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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