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Report for CCDS601.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
601.1 Public Homo sapiens 1 TMEM61 24 110 108 CCDS HistoryNCBI Gene:199964Re-query CCDS DB by CCDS ID:601.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 601.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371268.4 ENSP00000360315.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371268.4Link to Ensembl Protein Viewer:ENSP00000360315.3Re-query CCDS DB by Nucleotide ID:ENST00000371268Re-query CCDS DB by Protein ID:ENSP00000360315
Original member Current member NCBI NM_182532.3 NP_872338.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182532.3Link to Protein Sequence:NP_872338.1Re-query CCDS DB by Nucleotide ID:NM_182532Re-query CCDS DB by Protein ID:NP_872338Link to BLAST:NP_872338.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_872338.1 210 Q8N0U2 210 100% 0 0

Chromosomal Locations for CCDS 601.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 54981066 54981080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54986097 54986446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54991836 54992103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (633 nt):
ATGGCCCTGCCCCAGATGTGTGACGGGAGCCACTTGGCCTCCACCCTCCGCTATTGCATGACAGTCAGCG
GCACAGTGGTTCTGGTGGCCGGGACGCTCTGCTTCGCTTGGTGGAGCGAAGGGGATGCAACCGCCCAGCC
TGGCCAGCTGGCCCCACCCACGGAGTATCCGGTGCCTGAGGGCCCCAGCCCCCTGCTCAGGTCCGTCAGC
TTCGTCTGCTGCGGTGCAGGTGGCCTGCTGCTGCTCATTGGCCTGCTGTGGTCCGTCAAGGCCAGCATCC
CAGGGCCACCTCGATGGGACCCCTATCACCTCTCCAGAGACCTGTACTACCTCACTGTGGAGTCCTCAGA
GAAGGAGAGCTGCAGGACCCCCAAAGTGGTTGACATCCCCACTTACGAGGAAGCCGTGAGCTTCCCAGTG
GCCGAGGGGCCCCCAACACCACCTGCATACCCTACGGAGGAAGCCCTGGAGCCAAGTGGATCGAGGGATG
CCCTGCTCAGCACCCAGCCCGCCTGGCCTCCACCCAGCTATGAGAGCATCAGCCTTGCTCTTGATGCCGT
TTCTGCGGAGACGACACCGAGTGCCACACGCTCCTGCTCAGGCCTGGTTCAGACTGCACGGGGAGGAAGT
TAA

Translation (210 aa):
MALPQMCDGSHLASTLRYCMTVSGTVVLVAGTLCFAWWSEGDATAQPGQLAPPTEYPVPEGPSPLLRSVS
FVCCGAGGLLLLIGLLWSVKASIPGPPRWDPYHLSRDLYYLTVESSEKESCRTPKVVDIPTYEEAVSFPV
AEGPPTPPAYPTEEALEPSGSRDALLSTQPAWPPPSYESISLALDAVSAETTPSATRSCSGLVQTARGGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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