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Report for CCDS82562.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82562.1 Public Homo sapiens 2 METTL21A 24 110 108 CCDS HistoryNCBI Gene:151194Re-query CCDS DB by CCDS ID:82562.1Re-query CCDS DB by GeneID:151194See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 82562.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000458426.5 ENSP00000389684.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000458426.5Link to Ensembl Protein Viewer:ENSP00000389684.1Re-query CCDS DB by Nucleotide ID:ENST00000458426Re-query CCDS DB by Protein ID:ENSP00000389684
Original member Current member EBI ENST00000425132.5 ENSP00000400730.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000425132.5Link to Ensembl Protein Viewer:ENSP00000400730.1Re-query CCDS DB by Nucleotide ID:ENST00000425132Re-query CCDS DB by Protein ID:ENSP00000400730
Original member Current member NCBI NM_001330131.2 NP_001317060.1 Accepted alive Link to Nucleotide Sequence:NM_001330131.2Link to Protein Sequence:NP_001317060.1Re-query CCDS DB by Nucleotide ID:NM_001330131Re-query CCDS DB by Protein ID:NP_001317060Link to BLAST:NP_001317060.1
Original member Current member NCBI NM_001330133.3 NP_001317062.1 Accepted alive Link to Nucleotide Sequence:NM_001330133.3Link to Protein Sequence:NP_001317062.1Re-query CCDS DB by Nucleotide ID:NM_001330133Re-query CCDS DB by Protein ID:NP_001317062Link to BLAST:NP_001317062.1
Original member Current member NCBI NM_001330135.2 NP_001317064.1 Accepted alive Link to Nucleotide Sequence:NM_001330135.2Link to Protein Sequence:NP_001317064.1Re-query CCDS DB by Nucleotide ID:NM_001330135Re-query CCDS DB by Protein ID:NP_001317064Link to BLAST:NP_001317064.1
Original member Current member NCBI NM_001393573.1 NP_001380502.1 Accepted alive Link to Nucleotide Sequence:NM_001393573.1Link to Protein Sequence:NP_001380502.1Re-query CCDS DB by Nucleotide ID:NM_001393573Re-query CCDS DB by Protein ID:NP_001380502Link to BLAST:NP_001380502.1
Original member Current member NCBI NM_001393574.1 NP_001380503.1 Accepted alive Link to Nucleotide Sequence:NM_001393574.1Link to Protein Sequence:NP_001380503.1Re-query CCDS DB by Nucleotide ID:NM_001393574Re-query CCDS DB by Protein ID:NP_001380503Link to BLAST:NP_001380503.1
Original member Current member NCBI NM_001393575.1 NP_001380504.1 Accepted alive Link to Nucleotide Sequence:NM_001393575.1Link to Protein Sequence:NP_001380504.1Re-query CCDS DB by Nucleotide ID:NM_001393575Re-query CCDS DB by Protein ID:NP_001380504Link to BLAST:NP_001380504.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317060.1 90 Q8WXB1-2 90 100% 0 0
NP_001317062.1 90 Q8WXB1-2 90 100% 0 0
NP_001317064.1 90 Q8WXB1-2 90 100% 0 0
NP_001380502.1 90 Q8WXB1-2 90 100% 0 0
NP_001380503.1 90 Q8WXB1-2 90 100% 0 0
NP_001380504.1 90 Q8WXB1-2 90 100% 0 0

Chromosomal Locations for CCDS 82562.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 207582147 207582160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 207621806 207621917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 207624229 207624375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (273 nt):
ATGGCCCTCGTGCCCTATGAGGAGACCACGGAATTTGGGTTGCAGAAATTCCACAAGCCTCTTGCAACTT
TTTCCTTTGCAAACCACACGATCCAGATCCGGCAGGACTGGAGACACCTGGGAGTCGCAGCGGTGGTTTG
GGATGCGGCCATCGTTCTTTCCACATACCTGGAGATGGGAGCTGTGGAGCTCAGGGGCCGCTCTGCCGTG
GAGCTGGGTGCTGGCACGGGGCTGGTGGGCATAGTGGCTGCCCTGCTGGGAGGTGGAATTTAA

Translation (90 aa):
MALVPYEETTEFGLQKFHKPLATFSFANHTIQIRQDWRHLGVAAVVWDAAIVLSTYLEMGAVELRGRSAV
ELGAGTGLVGIVAALLGGGI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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