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Report for CCDS10495.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10495.1 Public Homo sapiens 16 ZNF213 24 110 108 CCDS HistoryNCBI Gene:7760Re-query CCDS DB by CCDS ID:10495.1Re-query CCDS DB by GeneID:7760See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10495.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396878.8 ENSP00000380087.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000396878.8Link to Ensembl Protein Viewer:ENSP00000380087.3Re-query CCDS DB by Nucleotide ID:ENST00000396878Re-query CCDS DB by Protein ID:ENSP00000380087
Original member Current member EBI ENST00000416391.6 ENSP00000403892.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000416391.6Link to Ensembl Protein Viewer:ENSP00000403892.3Re-query CCDS DB by Nucleotide ID:ENST00000416391Re-query CCDS DB by Protein ID:ENSP00000403892
Original member Current member EBI ENST00000576416.5 ENSP00000459177.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000576416.5Link to Ensembl Protein Viewer:ENSP00000459177.1Re-query CCDS DB by Nucleotide ID:ENST00000576416Re-query CCDS DB by Protein ID:ENSP00000459177
Original member Current member EBI ENST00000574902.5 ENSP00000460157.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000574902.5Link to Ensembl Protein Viewer:ENSP00000460157.1Re-query CCDS DB by Nucleotide ID:ENST00000574902Re-query CCDS DB by Protein ID:ENSP00000460157
Original member Current member NCBI NM_001134655.2 NP_001128127.1 Accepted alive Link to Nucleotide Sequence:NM_001134655.2Link to Protein Sequence:NP_001128127.1Re-query CCDS DB by Nucleotide ID:NM_001134655Re-query CCDS DB by Protein ID:NP_001128127Link to BLAST:NP_001128127.1
Original member Current member NCBI NM_004220.3 NP_004211.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004220.3Link to Protein Sequence:NP_004211.1Re-query CCDS DB by Nucleotide ID:NM_004220Re-query CCDS DB by Protein ID:NP_004211Link to BLAST:NP_004211.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128127.1 459 O14771-1 459 100% 0 0
NP_004211.1 459 O14771-1 459 100% 0 0

Chromosomal Locations for CCDS 10495.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 3137281 3137679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3138418 3138541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3138745 3138818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3138975 3139098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3140689 3141347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1380 nt):
ATGGCAGCCCCCTTGGAGGCCCAGGACCAGGCCCCTGGGGAGGGAGAAGGGCTTCTGATTGTGAAAGTGG
AAGATTCCTCCTGGGAACAGGAATCTGCCCAGCATGAGGATGGCAGGGATTCCGAAGCCTGCCGCCAGCG
CTTCCGGCAATTCTGCTACGGGGATGTGCATGGGCCTCATGAGGCCTTCAGCCAGCTCTGGGAGCTCTGC
TGCCGCTGGCTGCGGCCCGAGCTGCGTACCAAGGAGCAGATCCTGGAGCTGCTGGTGCTGGAGCAGTTCC
TGACAGTGCTGCCAGGGGAGATCCAGGGCTGGGTGCGTGAGCAGCACCCGGGAAGCGGTGAGGAGGCTGT
CGCCTTGGTGGAGGACCTACAGAAGCAGCCAGTGAAAGCCTGGCGACAGGATGTGCCCTCGGAGGAGGCG
GAACCCGAGGCTGCAGGCCGGGGATCCCAGGCCACGGGGCCTCCCCCGACGGTGGGGGCACGGAGGCGGC
CGTCTGTTCCCCAGGAGCAGCACAGCCATAGCGCCCAGCCTCCTGCTCTTCTTAAAGAGGGTCGTCCCGG
AGAGACGACGGACACCTGCTTTGTCTCTGGGGTCCATGGACCTGTGGCATTGGGAGACATCCCATTCTAT
TTCTCCCGGGAAGAATGGGGCACCCTGGACCCTGCTCAGCGGGATCTCTTCTGGGACATAAAGCGGGAGA
ACTCCCGGAACACCACCCTGGGTTTTGGGCTCAAAGGCCAAAGTGAGAAGTCCCTGCTGCAGGAGATGGT
GCCGGTGGTGCCAGGCCAGACAGGCAGCGACGTGACTGTGTCCTGGAGCCCCGAGGAGGCTGAGGCCTGG
GAGAGCGAGAACCGGCCGAGGGCGGCCCTGGGCCCAGTGGTGGGCGCGCGACGGGGGCGGCCACCCACTC
GCCGGCGCCAGTTCCGGGACCTGGCAGCCGAGAAGCCGCACAGCTGCGGGCAGTGTGGAAAGCGCTTCCG
CTGGGGCTCGGACCTGGCGCGGCACCAGCGCACGCACACGGGCGAGAAGCCACACAAGTGCCCTGAGTGC
GACAAGAGCTTCCGCAGCTCCTCGGACCTGGTGCGCCACCAAGGCGTGCACACGGGCGAGAAGCCCTTCT
CCTGTTCCGAGTGCGGCAAGAGCTTCAGCCGCAGCGCCTACCTGGCCGACCACCAGCGCATACACACGGG
CGAGAAGCCTTTCGGCTGCAGCGACTGCGGCAAGAGCTTCTCGCTGCGCTCCTACCTGCTGGACCATCGG
CGTGTGCACACCGGTGAGCGGCCCTTCGGCTGCGGAGAGTGCGACAAGAGCTTCAAGCAGCGCGCGCACC
TCATCGCGCATCAGAGCCTGCACGCCAAGATGGCCCAGCCCGTGGGGTGA

Translation (459 aa):
MAAPLEAQDQAPGEGEGLLIVKVEDSSWEQESAQHEDGRDSEACRQRFRQFCYGDVHGPHEAFSQLWELC
CRWLRPELRTKEQILELLVLEQFLTVLPGEIQGWVREQHPGSGEEAVALVEDLQKQPVKAWRQDVPSEEA
EPEAAGRGSQATGPPPTVGARRRPSVPQEQHSHSAQPPALLKEGRPGETTDTCFVSGVHGPVALGDIPFY
FSREEWGTLDPAQRDLFWDIKRENSRNTTLGFGLKGQSEKSLLQEMVPVVPGQTGSDVTVSWSPEEAEAW
ESENRPRAALGPVVGARRGRPPTRRRQFRDLAAEKPHSCGQCGKRFRWGSDLARHQRTHTGEKPHKCPEC
DKSFRSSSDLVRHQGVHTGEKPFSCSECGKSFSRSAYLADHQRIHTGEKPFGCSDCGKSFSLRSYLLDHR
RVHTGERPFGCGECDKSFKQRAHLIAHQSLHAKMAQPVG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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