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Report for CCDS2333.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2333.1 Public Homo sapiens 2 PPIL3 24 110 108 CCDS HistoryNCBI Gene:53938Re-query CCDS DB by CCDS ID:2333.1Re-query CCDS DB by GeneID:53938See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2333.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000392283.9 ENSP00000376107.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000392283.9Link to Ensembl Protein Viewer:ENSP00000376107.4Re-query CCDS DB by Nucleotide ID:ENST00000392283Re-query CCDS DB by Protein ID:ENSP00000376107
Original member Current member NCBI NM_130906.3 NP_570981.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_130906.3Link to Protein Sequence:NP_570981.1Re-query CCDS DB by Nucleotide ID:NM_130906Re-query CCDS DB by Protein ID:NP_570981Link to BLAST:NP_570981.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_570981.1 161 Q9H2H8-1 161 100% 0 0

Chromosomal Locations for CCDS 2333.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 200871395 200871521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200876919 200877037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200881421 200881488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200882342 200882435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200885698 200885772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200887613 200887615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (486 nt):
ATGTCTGTGACACTGCATACAGATGTAGGTGATATTAAAATTGAAGTCTTCTGTGAGAGGACACCCAAAA
CATGTGAGAATTTCTTGGCTCTTTGTGCCAGTAATTACTACAATGGCTGTATATTTCATAGGAATATCAA
GGGTTTCATGGTTCAAACAGGAGATCCAACAGGAACTGGAAGAGGAGGCAACAGTATTTGGGGCAAGAAG
TTTGAGGATGAATACAGTGAATATCTTAAGCACAATGTTAGAGGTGTTGTATCTATGGCTAATAATGGCC
CGAACACCAATGGATCTCAGTTCTTCATCACCTATGGCAAACAGCCACATTTGGACATGAAATACACCGT
ATTTGGAAAGGTAATAGATGGTCTGGAAACTCTAGATGAGTTGGAGAAGTTGCCAGTAAATGAGAAGACA
TACCGACCTCTTAATGATGTACACATTAAGGACATAACTATTCATGCCAACCCATTTGCTCAGTAG

Translation (161 aa):
MSVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRGGNSIWGKK
FEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKT
YRPLNDVHIKDITIHANPFAQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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