NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS94494.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94494.1 Public Homo sapiens 9 GOLGA2 24 110 108 CCDS HistoryNCBI Gene:2801Re-query CCDS DB by CCDS ID:94494.1Re-query CCDS DB by GeneID:2801See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94494.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000687179.1 ENSP00000510790.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000687179.1Link to Ensembl Protein Viewer:ENSP00000510790.1Re-query CCDS DB by Nucleotide ID:ENST00000687179Re-query CCDS DB by Protein ID:ENSP00000510790
Original member Current member NCBI NM_001366246.2 NP_001353175.2 Accepted alive Link to Nucleotide Sequence:NM_001366246.2Link to Protein Sequence:NP_001353175.2Re-query CCDS DB by Nucleotide ID:NM_001366246Re-query CCDS DB by Protein ID:NP_001353175Link to BLAST:NP_001353175.2

Chromosomal Locations for CCDS 94494.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 128257067 128257281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128257369 128257525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128257601 128257707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128257790 128257892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128257980 128258198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128258455 128258570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128259007 128259082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128259167 128259391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128260076 128260189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128260465 128260802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128261172 128261259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128261454 128261561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128261668 128261757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128262563 128262704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128263034 128263092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128265585 128265691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128265788 128265881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128265970 128266020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128266287 128266325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128267458 128267517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128267934 128267997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128268117 128268160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128268420 128268524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128272785 128272865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128273850 128273972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128275893 128275976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3009 nt):
ATGTGGCCCCAACCCCGCCTCCCTCCCCGCCCCGCGATGTCGGAAGAAACCCGACAGAGCAAATTGGCCG
CAGCGAAGAAAAAGTTGAGAGAATATCAGCAGAGGAATAGCCCTGGTGTTCCTACAGGAGCGAAAAAGAA
GAAGAAAATAAAAAATGGCAGTAACCCTGAGACAACCACTTCTGGTGGTTGCCACTCACCTGAGGATATT
CAGGACATTCTGAAGGTGCTGGTGTCCGACCTTAACCGTTCCAATGGGGTAGCGCTCCCCCCATTGGACA
AGTGGAAGACACCCAAGGACAATGCTGCTACTCTACAACCATCTGATGACACCGTGTTACCTGGCGGTGT
CCCTTCCCCTGGTGCCAGTCTCACTAGCATGGCGGCATCTCAGAATCATGATGCTGACAATGTCCCTAAT
CTCATGGATGAAACCAAGACTTTCTCATCAACCGAGAGCCTGCGACAACTCTCCCAACAGCTCAATGGTC
TTGTTTGTGAGTCTGCGACATGTGTCAATGGGGAGGGCCCTGCATCGTCTGCTAACCTGAAGGATCTGGA
GAAACAACAGAACCAAGAAATTACGGATCAGTTGGAAGAAGAAAAGAAAGAATGCCACCAAAAGCAGGGA
GCCCTAAGGGAGCAGTTACAGGTTCACATTCAGACCATAGGGATCCTCGTATCAGAGAAAGCTGAGTTAC
AGACAGCCCTGGCTCACACTCAGCATGCTGCCAGGCAGAAAGAAGGAGAGTCTGAAGATCTGGCCAGCCG
CCTGCAGTATTCCCGGCGGCGTGTGGGAGAGTTGGAGCGGGCTCTCTCTGCTGTCTCCACGCAGCAGAAG
AAGGCAGACAGGTACAACAAGGAGTTAACCAAAGAGAGAGACGCCCTCAGGCTGGAGTTATACAAGAACA
CCCAAAGCAATGAGGACCTGAAGCAAGAGAAATCAGAATTGGAAGAGAAGCTTCGGGTCCTAGTGACTGA
GAAGGCTGGCATGCAGCTTAACTTGGAAGAATTGCAAAAGAAGTTAGAGATGACGGAACTCCTGCTTCAA
CAGTTTTCAAGCCGGTGTGAAGCCCCTGATGCTAACCAGCAGTTACAGCAGGCCATGGAGGAGCGGGCAC
AGCTGGAAGCACACCTGGGGCAGGTAATGGAGTCGGTTAGACAACTACAAATGGAGAGAGATAAATATGC
GGAGAATCTCAAAGGAGAGAGCGCCATGTGGCGGCAGAGGATGCAGCAGATGTCAGAGCAGGTGCACACA
TTGAGAGAGGAGAAGGAATGTAGCATGAGTCGGGTACAGGAGCTGGAGACGAGCTTGGCTGAACTGAGGA
ACCAGATGGCTGAACCCCCGCCCCCAGAGCCCCCAGCAGGGCCCTCCGAGGTGGAGCAGCAGCTACAAGC
GGAGGCTGAGCACCTGCGGAAGGAGCTGGAGGGTCTGGCAGGACAGCTTCAAGCCCAGGTGCAAGACAAT
GAGGGCTTGAGTCGCCTGAACCGGGAGCAGGAGGAGAGGCTGCTGGAGCTGGAGCGGGCGGCCGAGCTCT
GGGGGGAGCAGGCGGAGGCGCGCAGGCAAATCCTGGAGACCATGCAGAACGACCGCACTACCATCAGCCG
CGCACTCTCCCAGAACCGGGAGCTCAAGGAGCAGCTGGCTGAGCTGCAGAGCGGATTTGTAAAGCTGACT
AATGAGAACATGGAGATCACCAGCGCACTGCAGTCGGAGCAGCACGTCAAGAGGGAGCTGGGAAAGAAGC
TGGGCGAGCTGCAGGAGAAGCTGAGCGAGCTGAAGGAAACGGTGGAGCTGAAGAGCCAAGAGGCTCAAAG
TCTGCAGCAGCAGCGAGACCAGTACCTGGGACACCTGCAGCAGTATGTGGCCGCCTATCAGCAGCTGACC
TCTGAGAAGGAGGTGCTGCATAATCAGCTACTGCTGCAGACCCAGCTCGTGGACCAGCTGCAGCAGCAGG
AAGCTCAGGGCAAAGCGGTGGCCGAGATGGCCCGCCAAGAGTTGCAGGAAACCCAGGAGCGCCTGGAAGC
TGCCACCCAGCAGAATCAGCAGCTACGGGCCCAGTTGAGCCTCATGGCTCACCCTGGGGAAGGAGATGGA
CTGGACCGGGAGGAGGAGGAGGATGAGGAGGAGGAGGAGGAGGAGGCGGTGGCAGTACCTCAGCCCATGC
CAAGCATCCCGGAGGACCTGGAGAGCCGGGAAGCCATGGTGGCATTTTTCAACTCAGCTGTAGCCAGTGC
CGAGGAGGAGCAGGCAAGGCTACGTGGGCAGCTGAAGGAGCAAAGGGTGCGCTGCCGGCGCCTGGCTCAC
CTGCTGGCCTCGGCCCAGAAGGAGCCTGAGGCAGCAGCCCCAGCCCCAGGGACCGGGGGTGATTCTGTGT
GTGGGGAGACCCACCGGGCCCTGCAGGGGGCCATGGAGAAGCTGCAGAGCCGCTTTATGGAGCTCATGCA
GGAGAAGGCAGACCTGAAGGAGAGGGTAGAGGAACTGGAACATCGCTGCATCCAGCTTTCTGGAGAGACA
GACACCATTGGAGAGTACATTGCACTGTACCAGAGCCAGAGGGCAGTGCTGAAGGAGCGGCACCGGGAGA
AGGAGGAGTACATCAGCAGGCTGGCCCAAGACAAGGAGGAGATGAAGGTGAAGCTGCTGGAGCTGCAGGA
GCTGGTCTTACGGCTTGTGGGCGACCGCAACGAGTGGCATGGCAGATTCCTGGCAGCTGCCCAGAACCCT
GCTGATGAGCCCACTTCAGGGGCCCCAGCCCCCCAGGAACTTGGGGCTGCCAACCAGCAGGGTGATCTTT
GCGAGGTGAGCCTCGCCGGCAGTGTGGAGCCTGCCCAAGGAGAGGCCAGGGAGGGTTCTCCCCGTGACAA
CCCCACTGCACAGCAGATCATGCAGCTGCTTCGTGAGATGCAGAACCCCCGGGAGCGCCCAGGCTTGGGC
AGCAACCCCTGCATTCCTTTTTTTTACCGGGCTGACGAGAATGATGAGGTGAAGATCACTGTCATCTAA

Translation (1002 aa):
MWPQPRLPPRPAMSEETRQSKLAAAKKKLREYQQRNSPGVPTGAKKKKKIKNGSNPETTTSGGCHSPEDI
QDILKVLVSDLNRSNGVALPPLDKWKTPKDNAATLQPSDDTVLPGGVPSPGASLTSMAASQNHDADNVPN
LMDETKTFSSTESLRQLSQQLNGLVCESATCVNGEGPASSANLKDLEKQQNQEITDQLEEEKKECHQKQG
ALREQLQVHIQTIGILVSEKAELQTALAHTQHAARQKEGESEDLASRLQYSRRRVGELERALSAVSTQQK
KADRYNKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQLNLEELQKKLEMTELLLQ
QFSSRCEAPDANQQLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAENLKGESAMWRQRMQQMSEQVHT
LREEKECSMSRVQELETSLAELRNQMAEPPPPEPPAGPSEVEQQLQAEAEHLRKELEGLAGQLQAQVQDN
EGLSRLNREQEERLLELERAAELWGEQAEARRQILETMQNDRTTISRALSQNRELKEQLAELQSGFVKLT
NENMEITSALQSEQHVKRELGKKLGELQEKLSELKETVELKSQEAQSLQQQRDQYLGHLQQYVAAYQQLT
SEKEVLHNQLLLQTQLVDQLQQQEAQGKAVAEMARQELQETQERLEAATQQNQQLRAQLSLMAHPGEGDG
LDREEEEDEEEEEEEAVAVPQPMPSIPEDLESREAMVAFFNSAVASAEEEQARLRGQLKEQRVRCRRLAH
LLASAQKEPEAAAPAPGTGGDSVCGETHRALQGAMEKLQSRFMELMQEKADLKERVEELEHRCIQLSGET
DTIGEYIALYQSQRAVLKERHREKEEYISRLAQDKEEMKVKLLELQELVLRLVGDRNEWHGRFLAAAQNP
ADEPTSGAPAPQELGAANQQGDLCEVSLAGSVEPAQGEAREGSPRDNPTAQQIMQLLREMQNPRERPGLG
SNPCIPFFYRADENDEVKITVI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH