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Report for CCDS40969.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40969.1 Public Mus musculus X Mbnl3 23 108 98 CCDS HistoryNCBI Gene:171170Re-query CCDS DB by CCDS ID:40969.1Re-query CCDS DB by GeneID:171170See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40969.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000114876.8 ENSMUSP00000110526.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114876.8Link to Ensembl Protein Viewer:ENSMUSP00000110526.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000114876Re-query CCDS DB by Protein ID:ENSMUSP00000110526
Original member Current member NCBI NM_134163.5 NP_598924.1 Accepted alive Link to Nucleotide Sequence:NM_134163.5Link to Protein Sequence:NP_598924.1Re-query CCDS DB by Nucleotide ID:NM_134163Re-query CCDS DB by Protein ID:NP_598924Link to BLAST:NP_598924.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598924.1 342 Q8R003 342 100% 0 0

Chromosomal Locations for CCDS 40969.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 51121007 51121018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 51123817 51123911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 51128921 51129071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 51130105 51130341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 51131429 51131620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 51139204 51139368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 51164418 51164594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1029 nt):
ATGACACCTGTCAATGTAGCTCTAATCCGTGATACCAAGTGGCTGACTTTAGAAGTCTGTAGAGAATTTC
AGAGAGGAACTTGCTCTCGAGCTGATGCAGAGTGCAGGTTTGCCCATCCGCCAAGAGTTTGCCATGTGGA
AAATGGCCGAGTGGTGGCCTGTTTTGATTCACTAAAGGGTCGGTGCACTCGTGAGAACTGCAAGTACCTC
CACCCTCCACCGCACTTAAAGTCGCAGCTAGAAGTTAATGGGAGAAACAATCTGATTCAACAGAAGACTG
CCGCAGCCATGTTCGCCCAGCACATGCAACTCATGCTGCAGAACGCTCAGATGTCATCTCTTGCGTCTTT
TCCTATGAATCCATCACTTGCAGCTAATCCTGCCATGGCTTTCAATCCTTACATGACTCATCCTGGCATG
GGCCTGGTTCCTGCTGAGCTTTTACCAAATGGTCCGGTTCTGATTTCTGGAAACCCTCCTCTTGCACTGC
CAGGAGTTCCTGGTCCAAAGCCAATTCGTACAGATAGACTGGAGGTTTGCCGTGAATTTCAGCGTGGAAA
TTGTACCCGTGGGGAGAGCGAGTGCCGCTATGCTCACCCTACGGATGTTTCCATGATTGAAGTCACTGAT
AATTCTGTGACAATCTGCATGGATTACATTAAAGGCCGATGCTCCCGGGAGAAATGCAAGTACTTTCATC
CTCCTCCCCACTTGCAGGCCAAACTCAGGGCAGCTCATCACCAGATGAACCATTCTGCTGCCAATGCAAT
GGCCCTGCCGCATGGTGCACTTCAACTGATACCAAAGAGGTCAGCCCTTGACAAGGCCAATGGTGCCACT
CCAGTCTTTAACCCCAGTGTTTTCCACTGCCAACAGGCTCTGGCTAACATGCAGATTCCTCAGCAGGCTT
TTATCCCAACAGTGCCCATGATGCACGGTGCTACACCTTCCACTGTGTCTACAGCAACACCACCTGCCAG
CAACGTTCCCTACGTTCCAACAACTACAGGCAACCAGTTGAAATATTGA

Translation (342 aa):
MTPVNVALIRDTKWLTLEVCREFQRGTCSRADAECRFAHPPRVCHVENGRVVACFDSLKGRCTRENCKYL
HPPPHLKSQLEVNGRNNLIQQKTAAAMFAQHMQLMLQNAQMSSLASFPMNPSLAANPAMAFNPYMTHPGM
GLVPAELLPNGPVLISGNPPLALPGVPGPKPIRTDRLEVCREFQRGNCTRGESECRYAHPTDVSMIEVTD
NSVTICMDYIKGRCSREKCKYFHPPPHLQAKLRAAHHQMNHSAANAMALPHGALQLIPKRSALDKANGAT
PVFNPSVFHCQQALANMQIPQQAFIPTVPMMHGATPSTVSTATPPASNVPYVPTTTGNQLKY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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