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Report for CCDS57710.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57710.1 Public Mus musculus 9 Cmtm7 23 108 98 CCDS HistoryNCBI Gene:102545Re-query CCDS DB by CCDS ID:57710.1Re-query CCDS DB by GeneID:102545See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57710.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000035009.15 ENSMUSP00000035009.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000035009.15Link to Ensembl Protein Viewer:ENSMUSP00000035009.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000035009Re-query CCDS DB by Protein ID:ENSMUSP00000035009
Original member Current member NCBI NM_133978.2 NP_598739.1 Accepted alive Link to Nucleotide Sequence:NM_133978.2Link to Protein Sequence:NP_598739.1Re-query CCDS DB by Nucleotide ID:NM_133978Re-query CCDS DB by Protein ID:NP_598739Link to BLAST:NP_598739.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598739.1 167 Q9ESD6-1 167 100% 0 0

Chromosomal Locations for CCDS 57710.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 114757278 114757291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114758805 114758886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114761907 114762005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114763219 114763392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114781668 114781802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (504 nt):
ATGTCTCATGGATCGGGGCTCGTCCGGACCACGTGCAGCAGCGGCGGCGCGCTGGGGCCAGGCCAGCCCT
CGGAGGGACTGCTGGACCGGGTGTACCCGCTCACCCACGGCGCCCTGTTCAAAGTGGCGCAGATGGTCAC
CCTGCTGATTGCCTTCATCTGTGTACGAAGCTCCGTTCCGATCGACTATGGTGCCCACAGCTTCTTCGAA
GTCGTCACCATGTGCGACCTGATAATGATCCTCATCTTTTACCTGGTGCACCTCTTCCGCTTCTACCGTG
TGCTCACCTGCATCAGCTGGCCCCTGTCGGAACTGCTGCACTATTTAATCGGCACGCTGCTTCTCCTCAT
CGCCTCCATAGTGATAGCCTCCAAGAGTTACAACCAGAGTGGCCTGGTAGCCGGAGCGATCTTTGGGTTC
CTGGCCAGCTTCCTCTGCCTAGCGAGCTTGTGGCTGTCCTACAAGATCACCTGTATAACCCAGTCTTCAG
ATGCATCTGCCTGA

Translation (167 aa):
MSHGSGLVRTTCSSGGALGPGQPSEGLLDRVYPLTHGALFKVAQMVTLLIAFICVRSSVPIDYGAHSFFE
VVTMCDLIMILIFYLVHLFRFYRVLTCISWPLSELLHYLIGTLLLLIASIVIASKSYNQSGLVAGAIFGF
LASFLCLASLWLSYKITCITQSSDASA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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