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Report for CCDS4048.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4048.1 Public Homo sapiens 5 TENT2 24 110 108 CCDS HistoryNCBI Gene:167153Re-query CCDS DB by CCDS ID:4048.1Re-query CCDS DB by GeneID:167153See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4048.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000296783.7 ENSP00000296783.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000296783.7Link to Ensembl Protein Viewer:ENSP00000296783.3Re-query CCDS DB by Nucleotide ID:ENST00000296783Re-query CCDS DB by Protein ID:ENSP00000296783
Original member Current member EBI ENST00000428308.6 ENSP00000396861.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000428308.6Link to Ensembl Protein Viewer:ENSP00000396861.2Re-query CCDS DB by Nucleotide ID:ENST00000428308Re-query CCDS DB by Protein ID:ENSP00000396861
Original member Current member EBI ENST00000453514.6 ENSP00000397563.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000453514.6Link to Ensembl Protein Viewer:ENSP00000397563.1Re-query CCDS DB by Nucleotide ID:ENST00000453514Re-query CCDS DB by Protein ID:ENSP00000397563
Original member Current member NCBI NM_001114393.3 NP_001107865.1 Accepted alive Link to Nucleotide Sequence:NM_001114393.3Link to Protein Sequence:NP_001107865.1Re-query CCDS DB by Nucleotide ID:NM_001114393Re-query CCDS DB by Protein ID:NP_001107865Link to BLAST:NP_001107865.1
Original member Current member NCBI NM_001114394.3 NP_001107866.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001114394.3Link to Protein Sequence:NP_001107866.1Re-query CCDS DB by Nucleotide ID:NM_001114394Re-query CCDS DB by Protein ID:NP_001107866Link to BLAST:NP_001107866.1
Original member Current member NCBI NM_001349552.2 NP_001336481.1 Accepted alive Link to Nucleotide Sequence:NM_001349552.2Link to Protein Sequence:NP_001336481.1Re-query CCDS DB by Nucleotide ID:NM_001349552Re-query CCDS DB by Protein ID:NP_001336481Link to BLAST:NP_001336481.1
Original member Current member NCBI NM_001349553.2 NP_001336482.1 Accepted alive Link to Nucleotide Sequence:NM_001349553.2Link to Protein Sequence:NP_001336482.1Re-query CCDS DB by Nucleotide ID:NM_001349553Re-query CCDS DB by Protein ID:NP_001336482Link to BLAST:NP_001336482.1
Original member Current member NCBI NM_001388102.1 NP_001375031.1 Accepted alive Link to Nucleotide Sequence:NM_001388102.1Link to Protein Sequence:NP_001375031.1Re-query CCDS DB by Nucleotide ID:NM_001388102Re-query CCDS DB by Protein ID:NP_001375031Link to BLAST:NP_001375031.1
Original member Current member NCBI NM_001388103.1 NP_001375032.1 Accepted alive Link to Nucleotide Sequence:NM_001388103.1Link to Protein Sequence:NP_001375032.1Re-query CCDS DB by Nucleotide ID:NM_001388103Re-query CCDS DB by Protein ID:NP_001375032Link to BLAST:NP_001375032.1
Original member Current member NCBI NM_001388105.1 NP_001375034.1 Accepted alive Link to Nucleotide Sequence:NM_001388105.1Link to Protein Sequence:NP_001375034.1Re-query CCDS DB by Nucleotide ID:NM_001388105Re-query CCDS DB by Protein ID:NP_001375034Link to BLAST:NP_001375034.1
Original member Current member NCBI NM_001388106.1 NP_001375035.1 Accepted alive Link to Nucleotide Sequence:NM_001388106.1Link to Protein Sequence:NP_001375035.1Re-query CCDS DB by Nucleotide ID:NM_001388106Re-query CCDS DB by Protein ID:NP_001375035Link to BLAST:NP_001375035.1
Original member Current member NCBI NM_001388107.1 NP_001375036.1 Accepted alive Link to Nucleotide Sequence:NM_001388107.1Link to Protein Sequence:NP_001375036.1Re-query CCDS DB by Nucleotide ID:NM_001388107Re-query CCDS DB by Protein ID:NP_001375036Link to BLAST:NP_001375036.1
Original member Current member NCBI NM_001388108.1 NP_001375037.1 Accepted alive Link to Nucleotide Sequence:NM_001388108.1Link to Protein Sequence:NP_001375037.1Re-query CCDS DB by Nucleotide ID:NM_001388108Re-query CCDS DB by Protein ID:NP_001375037Link to BLAST:NP_001375037.1
Original member Current member NCBI NM_001388109.1 NP_001375038.1 Accepted alive Link to Nucleotide Sequence:NM_001388109.1Link to Protein Sequence:NP_001375038.1Re-query CCDS DB by Nucleotide ID:NM_001388109Re-query CCDS DB by Protein ID:NP_001375038Link to BLAST:NP_001375038.1
Original member Current member NCBI NM_001388110.1 NP_001375039.1 Accepted alive Link to Nucleotide Sequence:NM_001388110.1Link to Protein Sequence:NP_001375039.1Re-query CCDS DB by Nucleotide ID:NM_001388110Re-query CCDS DB by Protein ID:NP_001375039Link to BLAST:NP_001375039.1
Original member Current member NCBI NM_001388111.1 NP_001375040.1 Accepted alive Link to Nucleotide Sequence:NM_001388111.1Link to Protein Sequence:NP_001375040.1Re-query CCDS DB by Nucleotide ID:NM_001388111Re-query CCDS DB by Protein ID:NP_001375040Link to BLAST:NP_001375040.1
Original member Current member NCBI NM_001388112.1 NP_001375041.1 Accepted alive Link to Nucleotide Sequence:NM_001388112.1Link to Protein Sequence:NP_001375041.1Re-query CCDS DB by Nucleotide ID:NM_001388112Re-query CCDS DB by Protein ID:NP_001375041Link to BLAST:NP_001375041.1
Original member Current member NCBI NM_173797.5 NP_776158.2 Accepted alive Link to Nucleotide Sequence:NM_173797.5Link to Protein Sequence:NP_776158.2Re-query CCDS DB by Nucleotide ID:NM_173797Re-query CCDS DB by Protein ID:NP_776158Link to BLAST:NP_776158.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001107865.1 484 Q6PIY7-1 484 100% 0 0
NP_001107866.1 484 Q6PIY7-1 484 100% 0 0
NP_001336481.1 484 Q6PIY7-1 484 100% 0 0
NP_001336482.1 484 Q6PIY7-1 484 100% 0 0
NP_001375031.1 484 Q6PIY7-1 484 100% 0 0
NP_001375032.1 484 Q6PIY7-1 484 100% 0 0
NP_001375034.1 484 Q6PIY7-1 484 100% 0 0
NP_001375035.1 484 Q6PIY7-1 484 100% 0 0
NP_001375036.1 484 Q6PIY7-1 484 100% 0 0
NP_001375037.1 484 Q6PIY7-1 484 100% 0 0
NP_001375038.1 484 Q6PIY7-1 484 100% 0 0
NP_001375039.1 484 Q6PIY7-1 484 100% 0 0
NP_001375040.1 484 Q6PIY7-1 484 100% 0 0
NP_001375041.1 484 Q6PIY7-1 484 100% 0 0
NP_776158.2 484 Q6PIY7-1 484 100% 0 0

Chromosomal Locations for CCDS 4048.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 79619649 79619785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 79619994 79620083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 79623252 79623489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 79640851 79640965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 79641105 79641196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 79642832 79642910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 79645123 79645192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 79648617 79648693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 79649062 79649190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 79656958 79657001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 79668892 79669028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 79679579 79679670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 79681982 79682061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 79685199 79685273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1455 nt):
ATGTTCCCAAACTCAATTTTGGGTCGCCCACCCTTCACTCCAAATCATCAACAACATAATAACTTCTTTA
CCCTGTCACCTACTGTTTATTCACACCAGCAGCTTATAGATGCACAATTCAACTTTCAGAATGCAGACTT
GTCTAGAGCTGTGTCATTACAGCAGCTGACATATGGAAATGTCAGTCCAATACAGACCTCAGCTTCCCCA
TTATTTCGAGGAAGGAAGAGATTAAGCGATGAAAAAAACCTTCCTCTTGACGGTAAACGGCAACGTTTCC
ATTCACCCCACCAAGAGCCAACTGTAGTTAACCAGATAGTGCCTTTATCAGGTGAACGAAGATACTCAAT
GCCACCATTGTTTCATACACATTATGTACCAGATATAGTCAGATGTGTTCCACCTTTTCGAGAAATTGCA
TTTTTAGAACCTAGAGAAATCACACTGCCTGAGGCCAAAGATAAGTTGAGTCAGCAGATACTGGAGTTAT
TTGAAACATGTCAGCAGCAAATAAGTGATTTAAAGAAGAAAGAACTCTGTCGAACACAGCTGCAGAGAGA
AATTCAGCTGTTATTTCCACAAAGCAGACTTTTTTTGGTTGGGTCCTCTTTAAATGGATTTGGTACCCGG
AGCAGTGATGGTGATTTATGCCTAGTTGTTAAGGAAGAACCATGTTTTTTTCAGGTAAATCAGAAGACTG
AAGCACGGCATATACTCACCTTAGTCCATAAACACTTCTGTACTAGACTTTCGGGCTACATTGAGAGACC
TCAGCTGATTCGAGCAAAAGTGCCAATTGTGAAGTTCAGGGATAAAGTCAGTTGTGTGGAGTTTGACTTG
AATGTAAACAATATTGTTGGAATAAGAAACACATTCCTTCTCAGAACTTATGCATACCTTGAAAATCGAG
TTCGTCCGTTAGTGCTGGTGATTAAGAAGTGGGCAAGTCACCATCAGATAAATGATGCCAGTCGTGGTAC
TTTAAGCAGCTATAGTCTTGTATTGATGGTTTTGCACTATTTACAAACCCTACCTGAACCCATCCTTCCA
TCCCTCCAAAAAATTTACCCAGAGTCTTTTAGTCCTGCTATACAGCTGCACCTTGTACATCAAGCTCCAT
GTAATGTTCCTCCTTACCTCTCAAAGAATGAATCAAACCTTGGGGACCTCTTACTGGGCTTTCTTAAATA
TTATGCTACAGAATTTGACTGGAATAGTCAAATGATTTCAGTTCGTGAAGCCAAAGCCATTCCAAGGCCT
GATGGTATTGAATGGAGAAATAAATACATCTGTGTAGAAGAACCTTTTGATGGAACAAATACAGCCAGAG
CAGTGCACGAAAAGCAGAAATTTGATATGATCAAGGATCAATTTTTAAAGTCATGGCACAGATTGAAAAA
CAAGAGAGATTTGAACAGTATACTACCTGTAAGAGCTGCTGTCCTGAAAAGATAA

Translation (484 aa):
MFPNSILGRPPFTPNHQQHNNFFTLSPTVYSHQQLIDAQFNFQNADLSRAVSLQQLTYGNVSPIQTSASP
LFRGRKRLSDEKNLPLDGKRQRFHSPHQEPTVVNQIVPLSGERRYSMPPLFHTHYVPDIVRCVPPFREIA
FLEPREITLPEAKDKLSQQILELFETCQQQISDLKKKELCRTQLQREIQLLFPQSRLFLVGSSLNGFGTR
SSDGDLCLVVKEEPCFFQVNQKTEARHILTLVHKHFCTRLSGYIERPQLIRAKVPIVKFRDKVSCVEFDL
NVNNIVGIRNTFLLRTYAYLENRVRPLVLVIKKWASHHQINDASRGTLSSYSLVLMVLHYLQTLPEPILP
SLQKIYPESFSPAIQLHLVHQAPCNVPPYLSKNESNLGDLLLGFLKYYATEFDWNSQMISVREAKAIPRP
DGIEWRNKYICVEEPFDGTNTARAVHEKQKFDMIKDQFLKSWHRLKNKRDLNSILPVRAAVLKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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