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Report for CCDS91797.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91797.1 Public Homo sapiens 13 N4BP2L2 24 110 108 CCDS HistoryNCBI Gene:10443Re-query CCDS DB by CCDS ID:91797.1Re-query CCDS DB by GeneID:10443See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91797.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000674327.1 ENSP00000501454.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000674327.1Link to Ensembl Protein Viewer:ENSP00000501454.1Re-query CCDS DB by Nucleotide ID:ENST00000674327Re-query CCDS DB by Protein ID:ENSP00000501454
Original member Current member NCBI NM_001387104.1 NP_001374033.1 Accepted alive Link to Nucleotide Sequence:NM_001387104.1Link to Protein Sequence:NP_001374033.1Re-query CCDS DB by Nucleotide ID:NM_001387104Re-query CCDS DB by Protein ID:NP_001374033Link to BLAST:NP_001374033.1

Chromosomal Locations for CCDS 91797.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 32517921 32518003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 32527408 32527532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 32535769 32537027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1467 nt):
ATGTCTTATGGTGAAATTGAAGGTAAATTCTTGGGACCTAGAGAAGAAGTAACGAGTGAGCCACGCTGTA
AAAAATTGAAGTCAACCACAGAGTCGTATGTTTTTCACAATCATAGTAATGCTGATTTTCACAGAATCCA
AGAGAAAACTGGAAATGATTGGGTCCCTGTGACCATCATTGATGTCAGAGGACATAGTTATTTGCAGGAG
AACAAAATCAAAACTACAGATTTGCATAGACCTTTGCATGATGAGATGCCTGGTAATAGACCAGATGTTA
TTGAATCCATTGATTCACAGGTTTTACAGGAAGCACGTCCTCCATTAGTATCCGCAGACGATGAGATATA
TAGCACAAGTAAAGCATTTATAGGACCCATTTACAAACCCCCTGAGAAAAAGAAACGTAATGAAGGGAGG
AATGAGGCACATGTTCTAAATGGTATAAATGACAGAGGAGGACAAAAAGAGAAACAGAAATTTAACTCTG
AAAAATCAGAGATTGACAATGAATTATTCCAGTTTTACAAAGAAATTGAAGAGCTTGAAAAGGAAAAAGA
TGGTTTTGAGAACAGTTGTAAAGAATCTGAACCTTCTCAGGAACAATTTGTTCCATTTTATGAGGGTCAT
AATAATGGTCTCTTAAAACCTGATGAAGAAAAGAAAGATCTTAGTAATAAAGCTATGCCATCACATTGTG
ATTATCAGCAGAACTTGGGGAATGAGCCAGACAAATATCCCTGTAATGGACAAGTAATACCTACATTTTG
TGACACTTCATTTACTTCTTTCAGGCCTGAATGGCAGTCAGTATATCCTTTTATAGTGCCCTATGGTCCC
CCTCTTCCCAGTTTGAACTATCATTTAAACATTCAGAGATTCAGTGGTCCACCAAATCCACCATCAAATA
TTTTCCAAGCCCAAGATGACTCTCAGATACAAAATGGATATTATGTAAATAATTGTCATGTTAACTGGAA
TTGCATGACTTTTGATCAGAACAATGAATATACTGACTGTAGTGAGAATAGGAGTAGTGTTCATCCCTCT
GGAAATGGCTGCAGTATGCAAGATCGATATGTGAGTAATGGTTTCTGTGAAGTCAGAGAAAGATGCTGGA
AAGATCATTGTATGGACAAGCATAATGGAACAGACAGGTTTGTGAACCAGCAGTTTCAAGAGGAAAAGTT
AAATAAATTGCAGAAGTTACTTATTCTTTTAAGAGGTCTGCCTGGTTCTGGGAAAACAACATTGTCTCGA
ATTCTGCTTGGTCAGAATCGTGATGGCATTGTGTTCAGCACTGATGACTATTTTCACCATCAAGATGGGT
ACAGGTATAATGTTAATCAACTTGGTGATGCCCATGACTGGAACCAGAACAGAGGAGGAATAAACATGGT
GTGTCTCGAAAGAAGATTGCTCAGATGTTGGATCGTTATGAATATCAAATGTCCATTTCTATTGTAA

Translation (488 aa):
MSYGEIEGKFLGPREEVTSEPRCKKLKSTTESYVFHNHSNADFHRIQEKTGNDWVPVTIIDVRGHSYLQE
NKIKTTDLHRPLHDEMPGNRPDVIESIDSQVLQEARPPLVSADDEIYSTSKAFIGPIYKPPEKKKRNEGR
NEAHVLNGINDRGGQKEKQKFNSEKSEIDNELFQFYKEIEELEKEKDGFENSCKESEPSQEQFVPFYEGH
NNGLLKPDEEKKDLSNKAMPSHCDYQQNLGNEPDKYPCNGQVIPTFCDTSFTSFRPEWQSVYPFIVPYGP
PLPSLNYHLNIQRFSGPPNPPSNIFQAQDDSQIQNGYYVNNCHVNWNCMTFDQNNEYTDCSENRSSVHPS
GNGCSMQDRYVSNGFCEVRERCWKDHCMDKHNGTDRFVNQQFQEEKLNKLQKLLILLRGLPGSGKTTLSR
ILLGQNRDGIVFSTDDYFHHQDGYRYNVNQLGDAHDWNQNRGGINMVCLERRLLRCWIVMNIKCPFLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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