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Report for CCDS81640.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81640.1 Public Homo sapiens 11 GRAMD1B 24 110 108 CCDS HistoryNCBI Gene:57476Re-query CCDS DB by CCDS ID:81640.1Re-query CCDS DB by GeneID:57476See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81640.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000638157.1 ENSP00000489896.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000638157.1Link to Ensembl Protein Viewer:ENSP00000489896.1Re-query CCDS DB by Nucleotide ID:ENST00000638157Re-query CCDS DB by Protein ID:ENSP00000489896
Original member Current member NCBI NM_001330396.3 NP_001317325.1 Accepted alive Link to Nucleotide Sequence:NM_001330396.3Link to Protein Sequence:NP_001317325.1Re-query CCDS DB by Nucleotide ID:NM_001330396Re-query CCDS DB by Protein ID:NP_001317325Link to BLAST:NP_001317325.1
Original member Current member NCBI NM_001387034.1 NP_001373963.1 Accepted alive Link to Nucleotide Sequence:NM_001387034.1Link to Protein Sequence:NP_001373963.1Re-query CCDS DB by Nucleotide ID:NM_001387034Re-query CCDS DB by Protein ID:NP_001373963Link to BLAST:NP_001373963.1
Original member Current member NCBI NM_001387035.1 NP_001373964.1 Accepted alive Link to Nucleotide Sequence:NM_001387035.1Link to Protein Sequence:NP_001373964.1Re-query CCDS DB by Nucleotide ID:NM_001387035Re-query CCDS DB by Protein ID:NP_001373964Link to BLAST:NP_001373964.1

Chromosomal Locations for CCDS 81640.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 123577464 123577577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123584312 123584332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123594082 123594166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123594735 123594838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123595942 123596037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123600468 123600548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123603426 123603541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123605322 123605478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123606609 123606798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123608659 123608802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123609795 123609913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123610196 123610338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123612761 123612864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123613455 123613658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123614745 123614835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123618693 123618800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123619107 123619224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123622506 123622595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2085 nt):
ATGGTGGAGAAGGGCTCAGATCACTCCTCGGACAAGTCCCCGTCCACACCGGAGCAGGGCGTGCAGCGCA
GCTGCTCCTCCCAGTCCGGCCGGAGCGGCGGCAAGAATTCCAAGAAAAGCCAGAGTTGGTATAATGTGTT
AAGCCCCACCTACAAGCAGAGAAATGAAGACTTCAGAAAGCTCTTTAAGCAGCTTCCAGACACGGAGCGC
CTCATTGTTGATTACTCATGTGCACTCCAAAGAGACATTCTCCTTCAGGGCCGACTCTACCTCTCTGAAA
ATTGGATCTGCTTCTACAGCAACATCTTCCGCTGGGAAACTCTGCTGACAGTCCGTTTGAAAGACATCTG
TTCCATGACTAAAGAAAAAACAGCTCGCCTCATTCCCAATGCCATCCAAGTTTGCACTGATTCAGAAAAG
CACTTCTTCACTTCGTTTGGGGCCCGGGATAGGACATATATGATGATGTTCCGGCTCTGGCAGAATGCTC
TCCTTGAAAAGCCTCTGTGTCCCAAGGAGCTCTGGCACTTTGTTCACCAGTGCTATGGGAACGAATTGGG
CCTGACCAGTGATGACGAGGACTACGTGCCCCCTGACGACGACTTCAACACAATGGGATACTGTGAAGAG
ATCCCTGTGGAAGAGAATGAAGTGAATGACAGCTCATCCAAGAGCAGCATAGAGACCAAGCCAGATGCCA
GTCCACAGCTGCCCAAGAAATCCATCACCAACAGCACACTAACATCCACAGGGAGCAGTGAGGCCCCCGT
CTCGTTTGATGGGCTGCCCCTGGAGGAAGAGGCGCTGGAGGGAGACGGGTCCCTGGAAAAGGAGCTCGCC
ATTGACAACATCATGGGGGAGAAGATTGAGATGATCGCTCCTGTGAACTCCCCTTCACTGGACTTCAATG
ACAATGAGGACATCCCCACTGAGCTCAGTGACTCTTCCGACACACACGATGAAGGAGAGGTCCAGGCCTT
CTATGAGGACCTGAGTGGCCGGCAGTACGTGAATGAAGTCTTCAACTTCAGCGTGGACAAGCTCTATGAC
CTCCTCTTCACCAACTCGCCCTTCCAGCGGGATTTCATGGAGCAGCGGCGCTTCTCTGATATCATCTTCC
ATCCATGGAAAAAGGAGGAGAATGGAAACCAGAGCCGAGTGATTCTTTACACCATCACCCTTACCAACCC
TCTGGCTCCCAAAACTGCCACTGTCAGGGAGACACAGACCATGTACAAGGCGAGCCAGGAGAGTGAATGT
TACGTGATAGATGCCGAAGTCCTCACCCACGACGTGCCCTACCATGACTACTTCTACACAATCAATCGCT
ACACGCTCACCCGTGTGGCTCGGAACAAGAGCCGACTCAGGGTCTCCACAGAGCTGCGCTATCGAAAACA
GCCCTGGGGGTTAGTGAAAACGTTCATCGAGAAGAACTTCTGGAGTGGGCTGGAGGACTACTTCCGCCAT
TTAGAGAGCGAGCTGGCCAAAACGGAGAGCACTTATTTGGCTGAGATGCACAGACAATCTCCCAAAGAGA
AGGCCAGCAAGACTACAACGGTGCGGAGGAGGAAGCGTCCCCATGCCCACCTGCGAGTCCCTCACCTGGA
AGAGGTGATGAGCCCGGTCACCACGCCCACAGATGAGGATGTGGGCCACAGGATCAAACATGTGGCAGGT
TCCACACAGACGCGGCATATCCCGGAGGACACCCCCAACGGTTTCCACCTGCAGAGCGTGTCCAAGCTGC
TGCTGGTTATCAGCTGTGTTCTGGTGCTGCTGGTCATCCTTAACATGATGCTCTTCTACAAACTCTGGAT
GTTGGAATACACCACGCAGACCCTCACTGCCTGGCAGGGTCTAAGGCTCCAAGAAAGGTTACCCCAGTCT
CAGACAGAATGGGCCCAGCTCTTAGAGTCCCAACAAAAGTACCACGATACTGAGCTCCAAAAATGGAGGG
AAATCATCAAATCCTCAGTGATGCTCCTTGACCAGATGAAGGACTCGCTCATCAACCTTCAGAACGGCAT
CAGGTCCCGCGACTACACGTCGGAAAGTGAAGAAAAGAGGAATCGCTATCATTGA

Translation (694 aa):
MVEKGSDHSSDKSPSTPEQGVQRSCSSQSGRSGGKNSKKSQSWYNVLSPTYKQRNEDFRKLFKQLPDTER
LIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWETLLTVRLKDICSMTKEKTARLIPNAIQVCTDSEK
HFFTSFGARDRTYMMMFRLWQNALLEKPLCPKELWHFVHQCYGNELGLTSDDEDYVPPDDDFNTMGYCEE
IPVEENEVNDSSSKSSIETKPDASPQLPKKSITNSTLTSTGSSEAPVSFDGLPLEEEALEGDGSLEKELA
IDNIMGEKIEMIAPVNSPSLDFNDNEDIPTELSDSSDTHDEGEVQAFYEDLSGRQYVNEVFNFSVDKLYD
LLFTNSPFQRDFMEQRRFSDIIFHPWKKEENGNQSRVILYTITLTNPLAPKTATVRETQTMYKASQESEC
YVIDAEVLTHDVPYHDYFYTINRYTLTRVARNKSRLRVSTELRYRKQPWGLVKTFIEKNFWSGLEDYFRH
LESELAKTESTYLAEMHRQSPKEKASKTTTVRRRKRPHAHLRVPHLEEVMSPVTTPTDEDVGHRIKHVAG
STQTRHIPEDTPNGFHLQSVSKLLLVISCVLVLLVILNMMLFYKLWMLEYTTQTLTAWQGLRLQERLPQS
QTEWAQLLESQQKYHDTELQKWREIIKSSVMLLDQMKDSLINLQNGIRSRDYTSESEEKRNRYH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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