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Report for CCDS74458.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74458.1 Public Homo sapiens 19 NLRP11 24 110 108 CCDS HistoryNCBI Gene:204801Re-query CCDS DB by CCDS ID:74458.1Re-query CCDS DB by GeneID:204801See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74458.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000592953.5 ENSP00000468196.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000592953.5Link to Ensembl Protein Viewer:ENSP00000468196.1Re-query CCDS DB by Nucleotide ID:ENST00000592953Re-query CCDS DB by Protein ID:ENSP00000468196
Original member Current member NCBI NM_001297743.3 NP_001284672.1 Accepted alive Link to Nucleotide Sequence:NM_001297743.3Link to Protein Sequence:NP_001284672.1Re-query CCDS DB by Nucleotide ID:NM_001297743Re-query CCDS DB by Protein ID:NP_001284672Link to BLAST:NP_001284672.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001284672.1 934 P59045-3 934 100% 0 0

Chromosomal Locations for CCDS 74458.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 55785625 55785871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55788807 55788977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55789229 55789399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55792301 55792471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55796080 55796250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55801572 55801739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55807853 55808014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55808769 55810312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2805 nt):
ATGAGGAGAAAATTCATGCTGCAATGGGAAAGTCACACTTTTGGAAAATTTCATTATAAATTTTTTCGTG
ACGTTTCGTCAGATGTGTTCTACATACTTCAATTAGCCTATGATTCTACCAGCTATTATTCAGCAAACAA
TCTCAATGTGTTCCTGATGGGAGAGAGAGCATCTGGAAAAACTATTGTTATAAATCTGGCTGTGTTGAGG
TGGATCAAGGGTGAGATGTGGCAGAACATGATCTCGTACGTCGTTCACCTCACTGCTCACGAAATAAACC
AGATGACCAACAGCAGCTTGGCTGAGCTAATCGCCAAGGACTGGCCTGACGGCCAGGCTCCCATTGCAGA
CATCCTGTCTGATCCCAAGAAACTCCTTTTCATCCTCGAGGACTTGGACAACATAAGATTCGAGTTAAAT
GTCAATGAAAGTGCTTTGTGTAGTAACAGCACCCAGAAAGTTCCCATTCCAGTTCTCCTGGTCAGTTTGC
TGAAGAGAAAAATGGCTCCAGGCTGCTGGTTCCTCATCTCCTCAAGGCCCACACGTGGGAATAATGTAAA
AACGTTCTTGAAAGAGGTAGATTGCTGCACGACCTTGCAGCTGTCGAATGGGAAGAGGGAGATATATTTT
AACTCTTTCTTTAAAGACCGCCAGAGGGCGTCGGCAGCCCTCCAGCTTGTACATGAGGATGAAATACTCG
TGGGTCTGTGCCGAGTCGCCATCTTATGCTGGATCACGTGTACTGTCCTGAAGCGGCAGATGGACAAGGG
GCGTGACTTCCAGCTCTGCTGCCAAACACCCACTGATCTACATGCCCACTTTCTTGCTGATGCGTTGACA
TCAGAGGCTGGACTTACTGCCAATCAGTATCACCTAGGTCTCCTAAAACGTCTGTGTTTGCTGGCTGCAG
GAGGACTGTTTCTGAGCACCCTGAATTTCAGTGGTGAAGACCTCAGATGTGTTGGGTTTACTGAGGCTGA
TGTCTCTGTGTTGCAGGCCGCGAATATTCTTTTGCCGAGCAACACTCATAAAGACCGTTACAAGTTCATA
CACTTGAACGTCCAGGAGTTTTGTACAGCCATTGCATTTCTGATGGCAGTACCCAACTATCTGATCCCCT
CAGGCAGCAGAGAGTATAAAGAGAAGAGAGAACAATACTCTGACTTTAATCAAGTGTTTACTTTCATTTT
TGGTCTTCTAAATGCAAACAGGAGAAAGATTCTTGAGACATCCTTTGGATACCAGCTACCGATGGTAGAC
AGCTTCAAGTGGTACTCGGTGGGATACATGAAACATTTGGACCGTGACCCGGAAAAGTTGACGCACCATA
TGCCTTTGTTTTACTGTCTCTATGAGAATCGGGAAGAAGAATTTGTGAAGACGATTGTGGATGCTCTCAT
GGAGGTTACAGTTTACCTTCAATCAGACAAGGATATGATGGTCTCATTATACTGTCTGGATTACTGCTGT
CACCTGAGGACACTTAAGTTGAGTGTTCAGCGCATCTTTCAAAACAAAGAGCCACTTATAAGGCCAACTG
CTAGTCAAATGAAGAGCCTTGTCTACTGGAGAGAGATCTGCTCTCTTTTTTATACAATGGAGAGCCTCCG
GGAGCTGCATATCTTTGACAATGACCTTAATGGTATTTCAGAAAGGATTCTGTCTAAAGCCCTGGAGCAT
TCTAGCTGTAAACTTCGCACACTCAAGTTGTCCTATGTCTCGACTGCTTCTGGTTTTGAAGACTTACTCA
AGGCTTTGGCTCGTAATCGGAGCCTGACATACCTGAGTATCAACTGTACGTCCATTTCCCTAAATATGTT
TTCACTTCTGCATGACATCCTGCACGAGCCCACATGCCAAATAAGTCATCTGAGCTTGATGAAATGTGAT
TTGCGAGCCAGCGAATGTGAAGAAATCGCCTCTCTCCTCATCAGTGGCGGGAGTCTGAGAAAACTGACCT
TATCCAGCAATCCGCTGAGGAGCGACGGGATGAACATACTGTGTGATGCCTTGCTTCATCCCAACTGCAC
TCTTATATCACTGGTGTTAGTCTTCTGCTGTCTCACTGAAAATTGCTGCAGCGCCCTTGGAAGAGTGCTT
CTGTTCAGCCCAACTCTAAGACAACTAGACCTGTGTGTGAATCGCTTAAAAAATTACGGAGTGTTGCATG
TGACGTTTCCCTTGCTGTTTCCAACCTGTCAGTTAGAGGAGCTTCATCTGTCTGGCTGTTTCTTTAGCAG
CGATATCTGTCAATATATTGCCATAGTTATTGCTACTAATGAAAAACTGAGGAGCCTGGAGATTGGGAGC
AACAAAATAGAAGATGCAGGAATGCAGCTGCTATGTGGTGGTTTGAGACATCCCAACTGCATGTTGGTGA
ATATTGGGCTAGAAGAGTGCATGTTAACCAGTGCCTGCTGTCGATCTCTTGCCTCTGTTCTTACCACCAA
CAAAACACTAGAAAGACTCAACTTGCTTCAAAATCACTTGGGCAATGATGGAGTTGCAAAACTTCTTGAG
AGCTTGATCAGCCCAGATTGTGTACTTAAGGTAGTTGGGCTTCCATTAACTGGCCTGAACACACAAACCC
AGCAGTTGCTGATGACTGTAAAGGAAAGAAAACCCAGTTTGATCTTTCTGTCTGAAACTTGGTCTTTAAA
GGAAGGCAGAGAAATTGGTGTGACACCTGCTTCTCAGCCAGGTTCAATAATACCTAATTCTAATTTGGAT
TACATGTTTTTCAAATTTCCCAGAATGTCTGCAGCCATGAGAACGTCAAATACAGCATCTAGGCAACCCC
TTTGA

Translation (934 aa):
MRRKFMLQWESHTFGKFHYKFFRDVSSDVFYILQLAYDSTSYYSANNLNVFLMGERASGKTIVINLAVLR
WIKGEMWQNMISYVVHLTAHEINQMTNSSLAELIAKDWPDGQAPIADILSDPKKLLFILEDLDNIRFELN
VNESALCSNSTQKVPIPVLLVSLLKRKMAPGCWFLISSRPTRGNNVKTFLKEVDCCTTLQLSNGKREIYF
NSFFKDRQRASAALQLVHEDEILVGLCRVAILCWITCTVLKRQMDKGRDFQLCCQTPTDLHAHFLADALT
SEAGLTANQYHLGLLKRLCLLAAGGLFLSTLNFSGEDLRCVGFTEADVSVLQAANILLPSNTHKDRYKFI
HLNVQEFCTAIAFLMAVPNYLIPSGSREYKEKREQYSDFNQVFTFIFGLLNANRRKILETSFGYQLPMVD
SFKWYSVGYMKHLDRDPEKLTHHMPLFYCLYENREEEFVKTIVDALMEVTVYLQSDKDMMVSLYCLDYCC
HLRTLKLSVQRIFQNKEPLIRPTASQMKSLVYWREICSLFYTMESLRELHIFDNDLNGISERILSKALEH
SSCKLRTLKLSYVSTASGFEDLLKALARNRSLTYLSINCTSISLNMFSLLHDILHEPTCQISHLSLMKCD
LRASECEEIASLLISGGSLRKLTLSSNPLRSDGMNILCDALLHPNCTLISLVLVFCCLTENCCSALGRVL
LFSPTLRQLDLCVNRLKNYGVLHVTFPLLFPTCQLEELHLSGCFFSSDICQYIAIVIATNEKLRSLEIGS
NKIEDAGMQLLCGGLRHPNCMLVNIGLEECMLTSACCRSLASVLTTNKTLERLNLLQNHLGNDGVAKLLE
SLISPDCVLKVVGLPLTGLNTQTQQLLMTVKERKPSLIFLSETWSLKEGREIGVTPASQPGSIIPNSNLD
YMFFKFPRMSAAMRTSNTASRQPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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