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Report for CCDS2891.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2891.1 Public Homo sapiens 3 KCTD6 24 110 108 CCDS HistoryNCBI Gene:200845Re-query CCDS DB by CCDS ID:2891.1Re-query CCDS DB by GeneID:200845See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2891.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355076.6 ENSP00000347188.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000355076.6Link to Ensembl Protein Viewer:ENSP00000347188.6Re-query CCDS DB by Nucleotide ID:ENST00000355076Re-query CCDS DB by Protein ID:ENSP00000347188
Original member Current member EBI ENST00000404589.8 ENSP00000384948.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000404589.8Link to Ensembl Protein Viewer:ENSP00000384948.3Re-query CCDS DB by Nucleotide ID:ENST00000404589Re-query CCDS DB by Protein ID:ENSP00000384948
Original member Current member EBI ENST00000490264.1 ENSP00000417490.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000490264.1Link to Ensembl Protein Viewer:ENSP00000417490.1Re-query CCDS DB by Nucleotide ID:ENST00000490264Re-query CCDS DB by Protein ID:ENSP00000417490
Original member Current member NCBI NM_001128214.2 NP_001121686.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001128214.2Link to Protein Sequence:NP_001121686.1Re-query CCDS DB by Nucleotide ID:NM_001128214Re-query CCDS DB by Protein ID:NP_001121686Link to BLAST:NP_001121686.1
Original member Current member NCBI NM_153331.3 NP_699162.3 Accepted alive Link to Nucleotide Sequence:NM_153331.3Link to Protein Sequence:NP_699162.3Re-query CCDS DB by Nucleotide ID:NM_153331Re-query CCDS DB by Protein ID:NP_699162Link to BLAST:NP_699162.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001121686.1 237 Q8NC69 237 100% 0 0
NP_699162.3 237 Q8NC69 237 100% 0 0

Chromosomal Locations for CCDS 2891.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 58498756 58498782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 58500946 58501632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (714 nt):
ATGGATAATGGAGACTGGGGCTATATGATGACTGACCCAGTCACATTAAATGTAGGTGGACACTTGTATA
CAACGTCTCTCACCACATTGACGCGTTACCCGGATTCCATGCTTGGAGCTATGTTTGGGGGGGACTTCCC
CACAGCTCGAGACCCTCAAGGCAATTACTTTATTGATCGAGATGGACCTCTTTTCCGATATGTCCTCAAC
TTCTTAAGAACTTCAGAATTGACCTTACCGTTGGATTTTAAGGAATTTGATCTGCTTCGGAAAGAAGCAG
ATTTTTACCAGATTGAGCCCTTGATTCAGTGTCTCAATGATCCTAAGCCTTTGTATCCCATGGATACTTT
TGAAGAAGTTGTGGAGCTGTCTAGTACTCGGAAGCTTTCTAAGTACTCCAACCCAGTGGCTGTCATCATA
ACGCAACTAACCATCACCACTAAGGTCCATTCCTTACTAGAAGGCATCTCAAATTATTTTACCAAGTGGA
ATAAGCACATGATGGACACCAGAGACTGCCAGGTTTCCTTTACTTTTGGACCCTGTGATTATCACCAGGA
AGTTTCTCTTAGGGTCCACCTGATGGAATACATTACAAAACAAGGTTTCACGATCCGCAACACCCGGGTG
CATCACATGAGTGAGCGGGCCAATGAAAACACAGTGGAGCACAACTGGACTTTCTGTAGGCTAGCCCGGA
AGACAGACGACTGA

Translation (237 aa):
MDNGDWGYMMTDPVTLNVGGHLYTTSLTTLTRYPDSMLGAMFGGDFPTARDPQGNYFIDRDGPLFRYVLN
FLRTSELTLPLDFKEFDLLRKEADFYQIEPLIQCLNDPKPLYPMDTFEEVVELSSTRKLSKYSNPVAVII
TQLTITTKVHSLLEGISNYFTKWNKHMMDTRDCQVSFTFGPCDYHQEVSLRVHLMEYITKQGFTIRNTRV
HHMSERANENTVEHNWTFCRLARKTDD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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