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Report for CCDS73004.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73004.1 Public Homo sapiens 1 ARL8A 24 110 108 CCDS HistoryNCBI Gene:127829Re-query CCDS DB by CCDS ID:73004.1Re-query CCDS DB by GeneID:127829See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 73004.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000614750.1 ENSP00000485023.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000614750.1Link to Ensembl Protein Viewer:ENSP00000485023.1Re-query CCDS DB by Nucleotide ID:ENST00000614750Re-query CCDS DB by Protein ID:ENSP00000485023
Original member Current member NCBI NM_001256129.2 NP_001243058.1 Accepted alive Link to Nucleotide Sequence:NM_001256129.2Link to Protein Sequence:NP_001243058.1Re-query CCDS DB by Nucleotide ID:NM_001256129Re-query CCDS DB by Protein ID:NP_001243058Link to BLAST:NP_001243058.1

Chromosomal Locations for CCDS 73004.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 202134516 202134516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202135150 202135220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202135707 202135800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202137965 202138038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202138368 202138448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202144450 202144572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (444 nt):
ATGATCGCTTTGTTCAACAAGCTGCTGGACTGGTTCAAGGCCCTATTCTGGAAGGAGGAGATGGAGCTCA
CGCTGGTCGGGCTTCAGTACTCGGGCAAGACCACCTTCGTCAACGTGATCGCGTCAGGACAGTTCAACGA
GGACATGATCCCCACCGTGGGTTTCAACATGCGCAAAATCACCAAAGGGAATGTGACTATCAAGCTCTGG
GACATTGGGGGACAGCCGCGTTTCCGCAGCATGTGGGAGCGCTACTGCCGAGGAGTGAGCGCCATCGTGT
ACATGGTGGATGCTGCTGACCAGGAGAAGATTGAGGCCTCTAAGAACGAGCTCCACAACCTACTGGACAA
ACCTCAGCTGCAGGGCATCCCGGAATCTGTCTGCCATCCAGGACCGAGAGATCTGCTGCTACTCCATCTC
TTGCAAAGAAAAGGACAACATTGA

Translation (147 aa):
MIALFNKLLDWFKALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLW
DIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPESVCHPGPRDLLLLHL
LQRKGQH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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