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Report for CCDS6669.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
6669.1 |
Public |
Homo sapiens |
9 |
RMI1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:80010](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:6669.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:80010](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 9 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 6669.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000325875.7 |
ENSP00000317039.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000325875.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000317039.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000325875](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000317039](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000445877.6 |
ENSP00000402433.2 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000445877.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000402433.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000445877](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000402433](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001358291.2 |
NP_001345220.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001358291.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001345220.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001358291](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001345220](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001345220.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001358292.2 |
NP_001345221.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001358292.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001345221.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001358292](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001345221](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001345221.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001358293.2 |
NP_001345222.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001358293.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001345222.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001358293](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001345222](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001345222.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001358294.2 |
NP_001345223.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001358294.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001345223.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001358294](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001345223](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001345223.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_024945.3 |
NP_079221.2 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_024945.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_079221.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_024945](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_079221](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_079221.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 6669.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1878 nt): ATGAATGTGACTAGTATTGCATTAAGAGCTGAAACTTGGCTTTTAGCTGCATGGCATGTTAAAGTACCTC CGATGTGGCTGGAAGCTTGTATTAACTGGATTCAAGAAGAAAATAATAATGTTAACTTGAGTCAGGCCCA AATGAATAAACAAGTGTTTGAGCAGTGGCTCCTTACTGATCTGAGGGATTTGGAGCATCCTCTTTTACCC GATGGCATTTTAGAAATTCCAAAAGGAGAATTAAATGGATTTTATGCTCTGCAGATTAATTCCTTGGTTG ATGTAAGTCAGCCTGCATACTCCCAGATACAGAAGTTGAGAGGAAAGAATACAACAAATGATCTAGTTAC AGCTGAAGCACAAGTAACCCCAAAACCTTGGGAAGCAAAGCCTTCACGAATGTTGATGCTGCAGCTAACT GATGGAATCGTACAAATACAGGGAATGGAATATCAGCCTATTCCAATTCTTCATAGTGATCTTCCTCCAG GTACAAAAATTTTGATTTATGGAAATATATCTTTCCGTCTTGGTGTTCTCTTATTGAAACCAGAAAACGT GAAAGTGTTAGGAGGTGAAGTAGATGCTCTTTTAGAAGAATATGCCCAAGAAAAAGTACTTGCAAGATTA ATAGGGGAACCTGATCTTGTAGTTTCAGTCATACCAAACAATTCTAACGAAAACATTCCCAGAGTTACAG ATGTTCTAGATCCTGCATTAGGTCCTTCTGATGAAGAACTCTTGGCAAGTCTTGATGAAAATGATGAGCT TACAGCAAATAATGACACTTCCTCAGAACGATGTTTCACCACAGGTAGTTCCTCAAATACCATTCCCACA AGACAGTCAAGTTTTGAGCCAGAATTTGTTATTTCTCCAAGACCAAAAGAGGAACCATCAAACCTATCTA TACATGTAATGGATGGAGAATTAGATGACTTTTCACTGGAGGAGGCCTTGCTTTTAGAAGAAACTGTCCA GAAAGAACAGATGGAAACTAAGGAATTGCAACCATTGACTTTTAACAGAAATGCCGATCGAAGTATAGAG AGATTTTCACATAATCCTAATACTACGAATAACTTTTCTTTGACTTGCAAAAATGGAAACAATAATTGGA GTGAAAAAAATGTATCTGAACAAATGACTAATGAAGACAAATCATTTGGTTGTCCATCTGTTAGAGACCA AAACAGGAGTATTTTTTCAGTTCATTGTAATGTACCCTTAGCCCATGATTTTACAAATAAAGAAAAGAAC TTAGAGACAGATAATAAAATAAAACAAACCAGCAGTTCAGATAGCCATTCCTTAAATAATAAAATATTAA ATAGAGAGGTGGTCAACTATGTACAGAAAAGGAATTCACAAATTTCTAATGAAAATGATTGTAATTTACA GAGTTGTTCTTTAAGATCATCAGAGAATAGCATTAATCTTTCTATTGCCATGGATTTGTATTCTCCACCC TTTGTCTATTTGTCTGTTCTAATGGCCAGCAAACCAAAGGAAGTTACAACAGTGAAAGTGAAAGCATTTA TTGTAACCTTAACTGGAAATCTCTCAAGTTCTGGTGGTATTTGGAGTATAACTGCAAAGGTGTCTGATGG TACTGCATATCTAGATGTAGACTTTGTGGATGAAATACTTACTAGCTTGATAGGGTTCTCAGTACCAGAA ATGAAACAGTCAAAAAAGGATCCTCTTCAATACCAAAAGTTCCTGGAAGGGTTGCAGAAATGTCAAAGAG ATCTAATAGATTTGTGCTGTCTAATGACTATTTCATTTAATCCTTCCTTGTCTAAAGCAATGGTACTGGC ATTACAAGATGTTAATATGGAACACCTTGAGAATCTAAAGAAGCGGTTAAATAAATAA
Translation (625 aa): MNVTSIALRAETWLLAAWHVKVPPMWLEACINWIQEENNNVNLSQAQMNKQVFEQWLLTDLRDLEHPLLP DGILEIPKGELNGFYALQINSLVDVSQPAYSQIQKLRGKNTTNDLVTAEAQVTPKPWEAKPSRMLMLQLT DGIVQIQGMEYQPIPILHSDLPPGTKILIYGNISFRLGVLLLKPENVKVLGGEVDALLEEYAQEKVLARL IGEPDLVVSVIPNNSNENIPRVTDVLDPALGPSDEELLASLDENDELTANNDTSSERCFTTGSSSNTIPT RQSSFEPEFVISPRPKEEPSNLSIHVMDGELDDFSLEEALLLEETVQKEQMETKELQPLTFNRNADRSIE RFSHNPNTTNNFSLTCKNGNNNWSEKNVSEQMTNEDKSFGCPSVRDQNRSIFSVHCNVPLAHDFTNKEKN LETDNKIKQTSSSDSHSLNNKILNREVVNYVQKRNSQISNENDCNLQSCSLRSSENSINLSIAMDLYSPP FVYLSVLMASKPKEVTTVKVKAFIVTLTGNLSSSGGIWSITAKVSDGTAYLDVDFVDEILTSLIGFSVPE MKQSKKDPLQYQKFLEGLQKCQRDLIDLCCLMTISFNPSLSKAMVLALQDVNMEHLENLKKRLNK
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