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Report for CCDS46402.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46402.1 Public Homo sapiens 2 GYPC 24 110 108 CCDS HistoryNCBI Gene:2995Re-query CCDS DB by CCDS ID:46402.1Re-query CCDS DB by GeneID:2995See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46402.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409836.3 ENSP00000386904.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409836.3Link to Ensembl Protein Viewer:ENSP00000386904.3Re-query CCDS DB by Nucleotide ID:ENST00000409836Re-query CCDS DB by Protein ID:ENSP00000386904
Original member Current member NCBI NM_016815.4 NP_058131.1 Accepted alive Link to Nucleotide Sequence:NM_016815.4Link to Protein Sequence:NP_058131.1Re-query CCDS DB by Nucleotide ID:NM_016815Re-query CCDS DB by Protein ID:NP_058131Link to BLAST:NP_058131.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_058131.1 109 P04921-3 109 100% 0 0

Chromosomal Locations for CCDS 46402.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 126656264 126656312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126693864 126693947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126695946 126696142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (330 nt):
ATGTGGTCGACGAGAAGCCCCAACAGCACGGCGTGGCCTCTCAGCCTCGAGCCTGATCCAGGGATGTCTG
GATGGCCGGATGGCAGAATGGAGACCTCCACCCCCACCATAATGGACATTGTCGTCATTGCAGGTGTGAT
TGCTGCTGTGGCCATCGTCCTAGTCTCCCTCCTCTTCGTCATGCTGCGCTACATGTACCGGCACAAGGGC
ACGTACCACACCAATGAGGCCAAGGGCACGGAGTTTGCTGAGAGTGCAGATGCAGCCCTGCAGGGAGACC
CTGCCCTCCAAGATGCTGGTGATAGCAGCAGAAAGGAGTACTTTATTTGA

Translation (109 aa):
MWSTRSPNSTAWPLSLEPDPGMSGWPDGRMETSTPTIMDIVVIAGVIAAVAIVLVSLLFVMLRYMYRHKG
TYHTNEAKGTEFAESADAALQGDPALQDAGDSSRKEYFI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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