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Report for CCDS60513.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60513.1 Public Homo sapiens 10 CCNY 24 110 108 CCDS HistoryNCBI Gene:219771Re-query CCDS DB by CCDS ID:60513.1Re-query CCDS DB by GeneID:219771See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 60513.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000339497.7 ENSP00000344275.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000339497.7Link to Ensembl Protein Viewer:ENSP00000344275.5Re-query CCDS DB by Nucleotide ID:ENST00000339497Re-query CCDS DB by Protein ID:ENSP00000344275
Original member Current member NCBI NM_001282852.2 NP_001269781.1 Accepted alive Link to Nucleotide Sequence:NM_001282852.2Link to Protein Sequence:NP_001269781.1Re-query CCDS DB by Nucleotide ID:NM_001282852Re-query CCDS DB by Protein ID:NP_001269781Link to BLAST:NP_001269781.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269781.1 316 Q8ND76-2 316 100% 0 0

Chromosomal Locations for CCDS 60513.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 35337054 35337207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 35501501 35501535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 35516523 35516623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 35525964 35525999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 35529973 35530030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 35530124 35530243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 35553019 35553185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 35566023 35566185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 35569054 35569170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGGGGAACACTACCTCGTGCTGCGTGTCGTCCAGTCCCAAGCTCCGGAGGAATGCCCACTCCCGGCTGG
AGTCCTACCGGCCAGACACGGACCTGAGCCGCGAGGACACGGGCTGCAACCTGCAGCACATCAGCGACCG
GGAGAACATAGACGTGAGAGAAAAACGCAAGAGTCTCTTCATTAACCATCATCCTCCAGGACAAATAGCA
AGGAAATACAGTTCCTGCTCCACCATTTTCCTAGATGATAGCACAGTCAGTCAACCAAACCTCAAGTATA
CAATTAAATGTGTCGCTCTTGCAATATATTATCACATCAAAAACAGGGACCCAGATGGAAGGATGCTCTT
AGATATTTTTGATGAAAATCTTCACCCTCTTTCGAAATCCGAAGTGCCACCAGATTATGACAAACACAAC
CCAGAGCAGAAGCAGATTTACCGGTTCGTTCGGACACTGTTCAGTGCTGCTCAGCTGACGGCTGAATGTG
CCATCGTCACCCTGGTGTACCTTGAAAGACTTTTAACATACGCAGAGATAGATATCTGTCCGGCCAACTG
GAAGCGGATTGTTTTAGGGGCGATCCTGCTGGCCTCCAAGGTGTGGGATGACCAGGCTGTATGGAATGTG
GATTACTGCCAGATCCTGAAAGACATCACGGTGGAGGACATGAACGAGCTAGAGCGACAGTTTCTTGAAT
TGCTGCAGTTCAACATCAATGTTCCTTCCAGTGTCTATGCCAAGTATTATTTTGATCTTCGTTCTCTGGC
AGAAGCGAACAACCTGAGCTTTCCCTTGGAGCCCCTGAGCAGGGAGAGGGCTCACAAGCTTGAGGCCATC
TCTCGCCTCTGCGAGGACAAGTACAAGGACCTAAGAAGATCCGCGAGGAAGCGCTCAGCCAGTGCAGACA
ACCTGACTCTGCCCCGGTGGTCCCCAGCCATCATCTCTTAA

Translation (316 aa):
MGNTTSCCVSSSPKLRRNAHSRLESYRPDTDLSREDTGCNLQHISDRENIDVREKRKSLFINHHPPGQIA
RKYSSCSTIFLDDSTVSQPNLKYTIKCVALAIYYHIKNRDPDGRMLLDIFDENLHPLSKSEVPPDYDKHN
PEQKQIYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPANWKRIVLGAILLASKVWDDQAVWNV
DYCQILKDITVEDMNELERQFLELLQFNINVPSSVYAKYYFDLRSLAEANNLSFPLEPLSRERAHKLEAI
SRLCEDKYKDLRRSARKRSASADNLTLPRWSPAIIS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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