NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS42599.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42599.1 Public Homo sapiens 19 KLK6 24 110 108 CCDS HistoryNCBI Gene:5653Re-query CCDS DB by CCDS ID:42599.1Re-query CCDS DB by GeneID:5653See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 42599.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000391808.5 ENSP00000375684.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391808.5Link to Ensembl Protein Viewer:ENSP00000375684.1Re-query CCDS DB by Nucleotide ID:ENST00000391808Re-query CCDS DB by Protein ID:ENSP00000375684
Original member Current member NCBI NM_001012965.3 NP_001012983.1 Accepted alive Link to Nucleotide Sequence:NM_001012965.3Link to Protein Sequence:NP_001012983.1Re-query CCDS DB by Nucleotide ID:NM_001012965Re-query CCDS DB by Protein ID:NP_001012983Link to BLAST:NP_001012983.1
Original member Current member NCBI NM_001319948.2 NP_001306877.1 Accepted alive Link to Nucleotide Sequence:NM_001319948.2Link to Protein Sequence:NP_001306877.1Re-query CCDS DB by Nucleotide ID:NM_001319948Re-query CCDS DB by Protein ID:NP_001306877Link to BLAST:NP_001306877.1
Original member Current member NCBI NM_001319949.2 NP_001306878.1 Accepted alive Link to Nucleotide Sequence:NM_001319949.2Link to Protein Sequence:NP_001306878.1Re-query CCDS DB by Nucleotide ID:NM_001319949Re-query CCDS DB by Protein ID:NP_001306878Link to BLAST:NP_001306878.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001012983.1 137 Q92876-2 137 100% 0 0
NP_001306877.1 137 Q92876-2 137 100% 0 0
NP_001306878.1 137 Q92876-2 137 100% 0 0

Chromosomal Locations for CCDS 42599.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 50959164 50959316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 50961744 50961880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 50963302 50963425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (414 nt):
ATGCTGTTGCGCCTGGCACGCCCAGCCAAACTCTCTGAACTCATCCAGCCCCTTCCCCTGGAGAGGGACT
GCTCAGCCAACACCACCAGCTGCCACATCCTGGGCTGGGGCAAGACAGCAGATGGTGATTTCCCTGACAC
CATCCAGTGTGCATACATCCACCTGGTGTCCCGTGAGGAGTGTGAGCATGCCTACCCTGGCCAGATCACC
CAGAACATGTTGTGTGCTGGGGATGAGAAGTACGGGAAGGATTCCTGCCAGGGTGATTCTGGGGGTCCGC
TGGTATGTGGAGACCACCTCCGAGGCCTTGTGTCATGGGGTAACATCCCCTGTGGATCAAAGGAGAAGCC
AGGAGTCTACACCAACGTCTGCAGATACACGAACTGGATCCAAAAAACCATTCAGGCCAAGTGA

Translation (137 aa):
MLLRLARPAKLSELIQPLPLERDCSANTTSCHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQIT
QNMLCAGDEKYGKDSCQGDSGGPLVCGDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTIQAK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH