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Report for CCDS2981.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2981.1 Public Homo sapiens 3 ZBTB20 24 110 108 CCDS HistoryNCBI Gene:26137Re-query CCDS DB by CCDS ID:2981.1Re-query CCDS DB by GeneID:26137See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2981.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357258.8 ENSP00000349803.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000357258.8Link to Ensembl Protein Viewer:ENSP00000349803.3Re-query CCDS DB by Nucleotide ID:ENST00000357258Re-query CCDS DB by Protein ID:ENSP00000349803
Original member Current member EBI ENST00000464560.5 ENSP00000417307.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000464560.5Link to Ensembl Protein Viewer:ENSP00000417307.1Re-query CCDS DB by Nucleotide ID:ENST00000464560Re-query CCDS DB by Protein ID:ENSP00000417307
Original member Current member EBI ENST00000481632.5 ENSP00000418092.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000481632.5Link to Ensembl Protein Viewer:ENSP00000418092.1Re-query CCDS DB by Nucleotide ID:ENST00000481632Re-query CCDS DB by Protein ID:ENSP00000418092
Original member Current member EBI ENST00000471418.5 ENSP00000419902.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000471418.5Link to Ensembl Protein Viewer:ENSP00000419902.1Re-query CCDS DB by Nucleotide ID:ENST00000471418Re-query CCDS DB by Protein ID:ENSP00000419902
Original member Current member EBI ENST00000462705.5 ENSP00000420324.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000462705.5Link to Ensembl Protein Viewer:ENSP00000420324.1Re-query CCDS DB by Nucleotide ID:ENST00000462705Re-query CCDS DB by Protein ID:ENSP00000420324
Original member Current member NCBI NM_001164343.2 NP_001157815.1 Accepted alive Link to Nucleotide Sequence:NM_001164343.2Link to Protein Sequence:NP_001157815.1Re-query CCDS DB by Nucleotide ID:NM_001164343Re-query CCDS DB by Protein ID:NP_001157815Link to BLAST:NP_001157815.1
Original member Current member NCBI NM_001164344.4 NP_001157816.1 Accepted alive Link to Nucleotide Sequence:NM_001164344.4Link to Protein Sequence:NP_001157816.1Re-query CCDS DB by Nucleotide ID:NM_001164344Re-query CCDS DB by Protein ID:NP_001157816Link to BLAST:NP_001157816.1
Original member Current member NCBI NM_001164345.4 NP_001157817.1 Accepted alive Link to Nucleotide Sequence:NM_001164345.4Link to Protein Sequence:NP_001157817.1Re-query CCDS DB by Nucleotide ID:NM_001164345Re-query CCDS DB by Protein ID:NP_001157817Link to BLAST:NP_001157817.1
Original member Current member NCBI NM_001164346.2 NP_001157818.1 Accepted alive Link to Nucleotide Sequence:NM_001164346.2Link to Protein Sequence:NP_001157818.1Re-query CCDS DB by Nucleotide ID:NM_001164346Re-query CCDS DB by Protein ID:NP_001157818Link to BLAST:NP_001157818.1
Original member Current member NCBI NM_001164347.2 NP_001157819.1 Accepted alive Link to Nucleotide Sequence:NM_001164347.2Link to Protein Sequence:NP_001157819.1Re-query CCDS DB by Nucleotide ID:NM_001164347Re-query CCDS DB by Protein ID:NP_001157819Link to BLAST:NP_001157819.1
Original member Current member NCBI NM_001348801.3 NP_001335730.1 Accepted alive Link to Nucleotide Sequence:NM_001348801.3Link to Protein Sequence:NP_001335730.1Re-query CCDS DB by Nucleotide ID:NM_001348801Re-query CCDS DB by Protein ID:NP_001335730Link to BLAST:NP_001335730.1
Original member Current member NCBI NM_001348802.3 NP_001335731.1 Accepted alive Link to Nucleotide Sequence:NM_001348802.3Link to Protein Sequence:NP_001335731.1Re-query CCDS DB by Nucleotide ID:NM_001348802Re-query CCDS DB by Protein ID:NP_001335731Link to BLAST:NP_001335731.1
Original member Current member NCBI NM_001348804.3 NP_001335733.1 Accepted alive Link to Nucleotide Sequence:NM_001348804.3Link to Protein Sequence:NP_001335733.1Re-query CCDS DB by Nucleotide ID:NM_001348804Re-query CCDS DB by Protein ID:NP_001335733Link to BLAST:NP_001335733.1
Original member Current member NCBI NM_001348805.3 NP_001335734.1 Accepted alive Link to Nucleotide Sequence:NM_001348805.3Link to Protein Sequence:NP_001335734.1Re-query CCDS DB by Nucleotide ID:NM_001348805Re-query CCDS DB by Protein ID:NP_001335734Link to BLAST:NP_001335734.1
Original member Current member NCBI NM_001393395.1 NP_001380324.1 Accepted alive Link to Nucleotide Sequence:NM_001393395.1Link to Protein Sequence:NP_001380324.1Re-query CCDS DB by Nucleotide ID:NM_001393395Re-query CCDS DB by Protein ID:NP_001380324Link to BLAST:NP_001380324.1
Original member Current member NCBI NM_001393396.1 NP_001380325.1 Accepted alive Link to Nucleotide Sequence:NM_001393396.1Link to Protein Sequence:NP_001380325.1Re-query CCDS DB by Nucleotide ID:NM_001393396Re-query CCDS DB by Protein ID:NP_001380325Link to BLAST:NP_001380325.1
Original member Current member NCBI NM_015642.7 NP_056457.3 Accepted alive Link to Nucleotide Sequence:NM_015642.7Link to Protein Sequence:NP_056457.3Re-query CCDS DB by Nucleotide ID:NM_015642Re-query CCDS DB by Protein ID:NP_056457Link to BLAST:NP_056457.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001157815.1 668 Q9HC78-2 668 100% 0 0
NP_001157816.1 668 Q9HC78-2 668 100% 0 0
NP_001157817.1 668 Q9HC78-2 668 100% 0 0
NP_001157818.1 668 Q9HC78-2 668 100% 0 0
NP_001157819.1 668 Q9HC78-2 668 100% 0 0
NP_001335730.1 668 Q9HC78-2 668 100% 0 0
NP_001335731.1 668 Q9HC78-2 668 100% 0 0
NP_001335733.1 668 Q9HC78-2 668 100% 0 0
NP_001335734.1 668 Q9HC78-2 668 100% 0 0
NP_001380324.1 668 Q9HC78-2 668 100% 0 0
NP_001380325.1 668 Q9HC78-2 668 100% 0 0
NP_056457.3 668 Q9HC78-2 668 100% 0 0

Chromosomal Locations for CCDS 2981.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 114339005 114339426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 114350274 114351858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2007 nt):
ATGACCGAGCGCATTCACAGCATCAACCTTCACAACTTCAGCAATTCCGTGCTCGAGACCCTCAACGAGC
AGCGCAACCGTGGCCACTTCTGTGACGTAACGGTGCGCATCCACGGGAGCATGCTGCGCGCACACCGCTG
CGTGCTGGCAGCCGGCAGCCCCTTCTTCCAGGACAAACTGCTGCTTGGCTACAGCGACATCGAGATCCCG
TCGGTGGTGTCAGTGCAGTCAGTGCAAAAGCTCATTGACTTCATGTACAGCGGCGTGCTACGGGTCTCGC
AGTCGGAAGCTCTGCAGATCCTCACGGCCGCCAGCATCCTGCAGATCAAAACAGTCATCGACGAGTGCAC
GCGCATCGTGTCACAGAACGTGGGCGATGTGTTCCCGGGGATCCAGGACTCGGGCCAGGACACGCCGCGG
GGCACTCCCGAGTCAGGCACGTCAGGCCAGAGCAGCGACACGGAGTCGGGCTACCTGCAGAGCCACCCAC
AGCACAGCGTGGACAGGATCTACTCGGCACTCTACGCGTGCTCCATGCAGAATGGCAGCGGCGAGCGCTC
TTTTTACAGCGGCGCAGTGGTCAGCCACCACGAGACTGCGCTCGGCCTGCCCCGCGACCACCACATGGAA
GACCCCAGCTGGATCACACGCATCCATGAGCGCTCGCAGCAGATGGAGCGCTACCTGTCCACCACCCCCG
AGACCACGCACTGCCGCAAGCAGCCCCGGCCTGTGCGCATCCAGACCCTAGTGGGCAACATCCACATCAA
GCAGGAGATGGAGGACGATTACGACTACTACGGGCAGCAAAGGGTGCAGATCCTGGAACGCAACGAATCC
GAGGAGTGCACGGAAGACACAGACCAGGCCGAGGGCACCGAGAGTGAGCCCAAAGGTGAAAGCTTCGACT
CGGGCGTCAGCTCCTCCATAGGCACCGAGCCTGACTCGGTGGAGCAGCAGTTTGGGCCTGGGGCGGCGCG
GGACAGCCAGGCTGAACCCACCCAACCCGAGCAGGCTGCAGAAGCCCCCGCTGAGGGTGGTCCGCAGACA
AACCAGCTAGAAACAGGTGCTTCCTCTCCGGAGAGAAGCAATGAAGTGGAGATGGACAGCACTGTTATCA
CTGTCAGCAACAGCTCCGACAAGAGCGTCCTACAACAGCCTTCGGTCAACACGTCCATCGGGCAGCCATT
GCCAAGTACCCAGCTCTACTTACGCCAGACAGAAACCCTCACCAGCAACCTGAGGATGCCTCTGACCTTG
ACCAGCAACACGCAGGTCATTGGCACAGCTGGCAACACCTACCTGCCAGCCCTCTTCACTACCCAGCCCG
CGGGCAGTGGCCCCAAGCCTTTCCTCTTCAGCCTGCCACAGCCCCTGGCAGGCCAGCAGACCCAGTTTGT
GACAGTGTCCCAGCCCGGTCTGTCGACCTTTACTGCACAGCTGCCAGCGCCACAGCCCCTGGCCTCATCC
GCAGGCCACAGCACAGCCAGTGGGCAAGGCGAAAAAAAGCCTTATGAGTGCACTCTCTGCAACAAGACTT
TCACCGCCAAACAGAACTACGTCAAGCACATGTTCGTACACACAGGTGAGAAGCCCCACCAATGCAGCAT
CTGTTGGCGCTCCTTCTCCTTAAAGGATTACCTTATCAAGCACATGGTGACACACACAGGAGTGAGGGCA
TACCAGTGTAGTATCTGCAACAAGCGCTTCACCCAGAAGAGCTCCCTCAACGTGCACATGCGCCTCCACC
GGGGAGAGAAGTCCTACGAGTGCTACATCTGCAAAAAGAAGTTCTCTCACAAGACCCTCCTGGAGCGACA
CGTGGCCCTGCACAGTGCCAGCAATGGGACCCCCCCTGCAGGCACACCCCCAGGTGCCCGCGCTGGCCCC
CCAGGCGTGGTGGCCTGCACGGAGGGGACCACTTACGTCTGCTCCGTCTGCCCAGCAAAGTTTGACCAAA
TCGAGCAGTTCAACGACCACATGAGGATGCATGTGTCTGACGGATAA

Translation (668 aa):
MTERIHSINLHNFSNSVLETLNEQRNRGHFCDVTVRIHGSMLRAHRCVLAAGSPFFQDKLLLGYSDIEIP
SVVSVQSVQKLIDFMYSGVLRVSQSEALQILTAASILQIKTVIDECTRIVSQNVGDVFPGIQDSGQDTPR
GTPESGTSGQSSDTESGYLQSHPQHSVDRIYSALYACSMQNGSGERSFYSGAVVSHHETALGLPRDHHME
DPSWITRIHERSQQMERYLSTTPETTHCRKQPRPVRIQTLVGNIHIKQEMEDDYDYYGQQRVQILERNES
EECTEDTDQAEGTESEPKGESFDSGVSSSIGTEPDSVEQQFGPGAARDSQAEPTQPEQAAEAPAEGGPQT
NQLETGASSPERSNEVEMDSTVITVSNSSDKSVLQQPSVNTSIGQPLPSTQLYLRQTETLTSNLRMPLTL
TSNTQVIGTAGNTYLPALFTTQPAGSGPKPFLFSLPQPLAGQQTQFVTVSQPGLSTFTAQLPAPQPLASS
AGHSTASGQGEKKPYECTLCNKTFTAKQNYVKHMFVHTGEKPHQCSICWRSFSLKDYLIKHMVTHTGVRA
YQCSICNKRFTQKSSLNVHMRLHRGEKSYECYICKKKFSHKTLLERHVALHSASNGTPPAGTPPGARAGP
PGVVACTEGTTYVCSVCPAKFDQIEQFNDHMRMHVSDG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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